Query= MSMg01no384_p21.b1 MSMg01no384_p21.b1 CHROMAT_FILE:
MSMg01no384_p21.b1 PHD_FILE: MSMg01no384_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:26 2005
(456 letters)
>mm_chr3_131424966_131425821
Length = 856
Score = 835 bits (432), Expect = 0.0
Identities = 450/460 (97%), Gaps = 8/460 (1%)
Strand = Plus / Minus
Query: 1 agaatcaccattgtaaactatttgtgcctggggccatcccacaaaataatgcaataataa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 656 agaatcaccattgtaaactatttgtgcctggggccaacccacaaaataatgcaataataa 597
Query: 61 agattctccctttgagctggatattattgcccaggtcaggctgctcccaggagtccggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agattctccctttgagctggatattattgcccaggtcaggctgctcccaggagtccggct 537
Query: 121 aggattacgttgggtgcgttgtagaaggctgcagctggcccaggtttcattgtcttacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aggattacgttgggtgcgttgtagaaggctgcagctggcccaggtttcattgtcttacat 477
Query: 181 aatgaacttccactatttcctttaataatcctcaacctctgccttggagagtcacataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aatgaacttccactatttcctttaataatcctcaacctctgccttggagagtcacataga 417
Query: 241 atttatccttttttt----atttcagttttttactccttccaatgccaatttcagtcgca 296
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atttatcc----tttccgaatttcagttttttactccttccaatgccaatttcagtcgca 361
Query: 297 gctagaatataaataaataaaatcccacatccttatggaataacacctatattttcttac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gctagaatataaataaataaaatcccacatccttatggaataacacctatattttcttac 301
Query: 357 gtagcttttacctttcctttgataacaccaccaggcatctttttctgaaacactaccacc 416
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtagcttttatctttcctttgataacaccaccaggcatctttttctgaaacactaccacc 241
Query: 417 ttgtcaaactccctcagagaattccaagatccaaagtaga 456
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttgtcaaactccctcagagaattccaagatccaaagtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_p21.g1 MSMg01no384_p21.g1 CHROMAT_FILE:
MSMg01no384_p21.g1 PHD_FILE: MSMg01no384_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:26 2005
(457 letters)
>mm_chr3_131201560_131202416
Length = 857
Score = 783 bits (405), Expect = 0.0
Identities = 444/457 (97%)
Strand = Plus / Plus
Query: 1 caagctattcccagcaacttagcatgacaactctgccttcagacttcagcatctgcagag 60
||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 caagccattcccggcaacttagcatgacaactctgccttcagactccagcatctgcagag 260
Query: 61 aataaggcctgtggcaaagctcttagagtaaacacaggacaatgattggggttttaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataaggcctgtggcaaagctcttagagtaaacacaggacaatgattggggttttaattc 320
Query: 121 ttacacgttgtagctctaaggatttttgcaatgaattttcttataagcccctcactctca 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ttacacgttgtagctctaaggatttttgcaatgaatttccttataagcccctcactctca 380
Query: 181 taactgcggtcatccctgaaattgctccagtgtagtatatggaaagaaatagagggcaaa 240
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 381 taactgcggtcatccctgaaattgttccagtgtaatatatggaaagaaatagagggcaaa 440
Query: 241 ggagagggtagtgccatgttagttaatatatatcacaatgatatgaaacaagattatgtg 300
|||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 441 ggagagggcagtgccgtgttagttaatatgtatcacaacgatatgaaacaagattatgtg 500
Query: 301 gcaggtgatattgattataaatagcaaatgcttaaattaaaaacagaaacaagtgaccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaggtgatattgattataaatagcaaatgcttaaattaaaaacagaaacaagtgaccac 560
Query: 361 caatatttcccatggcgtggagctgagcctagtgttttattggctatcatttctggtgtt 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 caatatttcccatggcgtggagctgagcctagtgtttcattggctatcatttctggtgtt 620
Query: 421 agataggctgtctctcccccatgcacagggaacgtgg 457
|||||||||||||||| |||||||||||||||||||
Sbjct: 621 ggataggctgtctctcctccatgcacagggaacgtgg 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
