Query= MSMg01no388_a07.b1 MSMg01no388_a07.b1 CHROMAT_FILE:
MSMg01no388_a07.b1 PHD_FILE: MSMg01no388_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:15 2005
(494 letters)
>mm_chr3_37156775_37157669
Length = 895
Score = 924 bits (478), Expect = 0.0
Identities = 487/490 (99%), Gaps = 1/490 (0%)
Strand = Plus / Plus
Query: 6 ggaattctgagcc-cagcctgagctgtggaggctgagacatctcctttcccctctggcaa 64
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 206 ggaattctgagccacagcctgagctgtggaggctgagacatctcctttcccgtctggcaa 265
Query: 65 gccacatcaggaggtgagcccaagccgggcctcactccctccacctctgatttcccctac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gccacatcaggaggtgagcccaagccgggcctcactccctccacctctgatttcccctac 325
Query: 125 ctaacagcgcagccatgggctcactgagtgccattctgaaaaccagaagccagagctttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctaacagcgcagccatgggctcactgagtgccattctgaaaaccagaagccagagctttc 385
Query: 185 aaggaatttctttaacagtgagttgaagattctcgagctcactgttcagctttttaccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaggaatttctttaacagtgagttgaagattctcgagctcactgttcagctttttaccaa 445
Query: 245 actaacatactagccaaaataaaaagcacattgctacctaaaacaataaataggaagcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 actaacatactagccaaaataaaaagcacattgctacctaaaacaataaataggaagcat 505
Query: 305 tacatcatcagaaagtgtgcatcgagccacatgtatttggtatgtctctagatgctacca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tacatcatcagaaagtgtgcatcgagccacatgtatttggtatgtctctagatgctacca 565
Query: 365 gctcactcatctgtgctggagggccgggggggggaacatgctggtctgtgtgagaaatga 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gctcactcatctgtgctggggggccgggggggggaacatgctggtctgtgtgagaaatga 625
Query: 425 cagttgagaagagacccacatgacatgagatggtcctcagccacatttatctttccctca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagttgagaagagacccacatgacatgagatggtcctcagccacatttatctttccctca 685
Query: 485 ggttcggagt 494
||||||||||
Sbjct: 686 ggttcggagt 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_a07.g1 MSMg01no388_a07.g1 CHROMAT_FILE:
MSMg01no388_a07.g1 PHD_FILE: MSMg01no388_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:15 2005
(249 letters)
>mm_chr3_37252861_37253509
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 cgttgagtggcaaagagtgcaggaggcaggctgacctggctgtcatccccactccttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cgttgagtggcaaagagtgcaggaggcaggctgacctggctgtcatccccactccttgtg 390
Query: 61 ggtgtgggctaaccatcaacctctgccgagctcaggtccccaaccccccatccgatgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggtgtgggctaaccatcaacctctgccgagctcaggtccccaaccccccatccgatgcct 330
Query: 121 ggaagcagagaattgtgaccaatcagtaatcaggagaagcccagggtaggtccagcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggaagcagagaattgtgaccaatcagtaatcaggagaagcccagggtaggtccagcattt 270
Query: 181 cttattaccttcatttcccctaacgaagaacatctggaatagatttaatgctagcatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cttattaccttcatttcccctaacgaagaacatctggaatagatttaatgctagcatgtc 210
Query: 241 cacagtcag 249
|||||||||
Sbjct: 209 cacagtcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
