Query= MSMg01no389_d12.b1 MSMg01no389_d12.b1 CHROMAT_FILE:
MSMg01no389_d12.b1 PHD_FILE: MSMg01no389_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:45 2005
(592 letters)
>mm_chr3_62336211_62337202
Length = 992
Score = 793 bits (410), Expect = 0.0
Identities = 442/464 (95%), Gaps = 19/464 (4%)
Strand = Plus / Minus
Query: 1 taggacaccctcttccggcctctatgatgtacgtacatgcatacaagactcattaaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 taggacaccctcttccggcctctatgatgtacgtacatgcatacaagactcattaaattt 405
Query: 61 aaaaaatgaatatttcaaaaatgttctgaaaaatgttaagctacttgaaatattttgttt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaaaaatggatatttcaaaaatgttctgaaaaatgttaagctacttgaaatattttgttt 345
Query: 121 atttctttttctctaagtagaagagaatccacattgttctccaagaatgaaaatctggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atttctttttctctaagtagaagagaatccacattgttctccaagaatgaaaatctggtc 285
Query: 181 ttgggcttttcctagtcattcttcctgggaacaaatgcaaaattccaggcttcatcccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttgggcttttcctagtcattcttcctgggaacaaatgcaaaattccaggcttcatcccac 225
Query: 241 aaaacaattttcctggaag------------------ggagactttcaatgccaaagctg 282
||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 224 aaaacaattttcctggaagtgagaagtttcctggaagggagactttcgatgccaaagctg 165
Query: 283 aaatgtactcaggaaaaactaagaaatttgattatcttttttttt-caaggtttatttta 341
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 164 aaatgtactcaggaaaaactaagaaatttgattatcttttttttttcaagatttatttta 105
Query: 342 tatatgtgagaacactgtcaatgtcttcagacacaccagaagagagcattggatcccatt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tatatgtgagaacactgtcaatgtcttcagacacaccagaagagagcattggatcccatt 45
Query: 402 acagatggttgtgagccaccatgtggttggtgggaattgaaccc 445
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 acagatggttgtgagccaccatgtggttggtgggaattgaaccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_d12.g1 MSMg01no389_d12.g1 CHROMAT_FILE:
MSMg01no389_d12.g1 PHD_FILE: MSMg01no389_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:45 2005
(552 letters)
>mm_chr3_62305768_62306719
Length = 952
Score = 1060 bits (548), Expect = 0.0
Identities = 551/552 (99%)
Strand = Plus / Plus
Query: 1 agcagctgcacaatttgctcttctcgacgttcatccatgtgcactacagctctctatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagctgcacaatttgctcttctcgacgttcatccatgtgcactacagctctctatttt 260
Query: 61 gtaaaaaagaaaaaggatctgttaatacatacaaacatgcataaaatgactttatattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaaaaaagaaaaaggatctgttaatacatacaaacatgcataaaatgactttatattta 320
Query: 121 agatgaaaatatactaattctaatttgctagagacaaagtattgtatgttcaacatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgaaaatatactaattctaatttgctagagacaaagtattgtatgttcaacatatgt 380
Query: 181 acaagtaagttatacttaaccatgcttgccctctagcctaatctcccttcctaggtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaagtaagttatacttaaccatgcttgccctctagcctaatctcccttcctaggtgaaa 440
Query: 241 ttcatggcaacatttgtatgtcctgctaggccttttagcctgtcatgtgtttacaaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ttcatggcaacatttgtatgtcctgctaggccttttagcctgtcatgtgcttacaaaatc 500
Query: 301 tgctctacagatgactggcagtagagctttcttgtctcttcctatcactttggtctcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctctacagatgactggcagtagagctttcttgtctcttcctatcactttggtctcttt 560
Query: 361 agattccacctccaaatgcttacaaatgtccaataatcaaaactcaagtcctctaaacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agattccacctccaaatgcttacaaatgtccaataatcaaaactcaagtcctctaaacag 620
Query: 421 atcttgaaaagtgtataaataccattatgctatgaacagcatgcagtcttatttaaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcttgaaaagtgtataaataccattatgctatgaacagcatgcagtcttatttaaacaa 680
Query: 481 tagcaaagccaataaatacagacgtttctttaaaatattaacaaaaataaactgtgtgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagcaaagccaataaatacagacgtttctttaaaatattaacaaaaataaactgtgtgac 740
Query: 541 aaaaaagctgaa 552
||||||||||||
Sbjct: 741 aaaaaagctgaa 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
