NCTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCG
GAATTCTTTTTACTCTCCATAGAGGAGAAGTAGCAGGATGGCTTCCCATG
GATGTTCATTACCAATTGATTGATTCTCACCCTGGTGAGACAATAATCTT
TGCTGTGCAGACACCAGCAGAGCCTGCTAATAAATAAAGTTCTAAAACAG
AAAGTCTCGGTTAGTAAAGTTCATGGTTTTAATGAGACATTCTTTGAAGG
AAAAAAAAACAAAACAAACCATCATTGTGTCTTAGAAAATCACTAGCCAC
AGGTTCCTATGTAACCTTATACAGAATAGTTTACAGAATGTCTGGCCTGG
GCTTAGTGGTTCCTCTTCTTGTCTCTATCAACTGGCTTGATTAGCCACTC
TCTGAAAACCACCATGGTCTTGGGTAGCTTCTGTCTTTCGTGTTAAATAC
CTGAAACAGAATTAGAACTCTCCTGAGTTCCTCCCATCCCTGAGGTTTGC
CAAGTTTTANAGATTTACCCCTTTGGAACGACCGGCGCGATTCTAGGCTA
GCATTCTTGCCCCTCCACATCCATGTCCATCTATGTTCCAAAGACTCAGA
GAGGCTTTACTTAATCCTCCTCATCGGACCCTCTTTACGGCCGCGTAAGT
TGGTGCCCCTGCCTATCCCGCCTAATCCCCCTTCGCTCCTCGCCCTCCCC
CTCCCCCCCCTTCCGCCACACCCCCATCCCTGGCTCCCCTCCTTCTAATC
ACACCTTTCTCCCCCCCCCCTTCCCTCTTC

NNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTACTGAATTCCAAGCT
CCTCATCTTCAAGGATTTTCTAGGACATTGGAACACTGACATAGGCTTAC
CTATGTCAGAATTCAATCTTTAAAGGCACTTATAATAAAACAATACTGAA
AGAGAGCATGTGGATCCATACACCAGACTAATGAGGAGACAGGGTATGAG
TATATGGGTTATGAGAATGCCAAGGTTCCAGGAGGTTGAGTTTCCTTGAA
ACTCTTTGCCTCGTGAGTGCTTCCAGGCCTCTCTGTCTGTCAAGCAGACT
TCACTGGAGTGGACATAGCAACCAAACATTATTCTAGATAGAGAAAGGCT
GAAAATATTTCCTTAAAAACAAGAACAGATACAGGAGTAAATGTGACAAA
GGTGTCTACTTTCTCAAGTTTACTTCAATATAACACTCAAAGCCTTAGGA
GATAAATAAGGCAAGAGAAAGTAATAAAATTGGTAGAAATATGAAAAAAC
TCACTGTCACTATTTGAAAATTATATAGACATATCTGTAAAAGATCACTT
AAGATTCCTCAAAAAAAAATCTCTGAAAAAAGAAAATCAGGAGAGAGTCT
TCCGTCTCCCATGTCCCTATGTAGGTCCCCAGCAGAAGGGTGGCCCAAAT
TAACGATGGATACCCCCTACCTGGAACTGGGACTTGTTTGTTCCCAATGA
CCTTGAACCCCAA

Query= MSMg01no389_e20.b1 MSMg01no389_e20.b1 CHROMAT_FILE:
MSMg01no389_e20.b1 PHD_FILE: MSMg01no389_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:51 2005
         (454 letters)



>mm_chr3_136552549_136553402
          Length = 854

 Score =  820 bits (424), Expect = 0.0
 Identities = 445/454 (98%), Gaps = 6/454 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctttttactctcc--atagaggagaagtagcaggatggcttcccatggatgttca 61
           |||||||||||||   ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctttttac---cctgatagaggagaagtagcaggatggcttcccatggatgttca 260

                                                                       
Query: 62  ttaccaattgattgattctcaccctggtgagacaataatctttgctgtgcagacaccagc 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaccaattgattgattctcaccctggtgagacaataatctttgctgtgcagacaccagc 320

                                                                       
Query: 122 agagcctgctaataaataaagttctaaaacagaaagtctcggttagtaaagttcatggtt 181
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 agagcctgctaataaataaagttctaaaacagaaagtctcggttagtaaaattcatggtt 380

                                                                       
Query: 182 ttaatgagacattctttgaaggaaaaaaaaa-caaaacaaaccatcattgtgtcttagaa 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 ttaatgagacattctttgaaggaaaaaaaaaacaaaacaaaccatcattgtgtcttagaa 440

                                                                       
Query: 241 aatcactagccacaggttcctatgtaaccttatacagaatagtttacagaatgtctggcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatcactagccacaggttcctatgtaaccttatacagaatagtttacagaatgtctggcc 500

                                                                       
Query: 301 tgggcttagtggttcctcttcttgtctctatcaactggcttgattagccactctctgaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggcttagtggttcctcttcttgtctctatcaactggcttgattagccactctctgaaa 560

                                                                       
Query: 361 accaccatggtcttgggtagcttctgtctttcgtgttaaatacctgaaacagaattagaa 420
           ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 561 accaccatggtcttgggtagcttctgtttttcgtgttaaatacctgaaaaagaattagaa 620

                                             
Query: 421 ctctcctgagttcctcccatccctgaggtttgcc 454
           ||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctcctgagttcctcccatccctgaggtttgcc 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space:   374736
Effective search space used:   374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)