Query= MSMg01no391_g21.b1 MSMg01no391_g21.b1 CHROMAT_FILE:
MSMg01no391_g21.b1 PHD_FILE: MSMg01no391_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:38 2005
(346 letters)
>mm_chr3_51477671_51478415
Length = 745
Score = 632 bits (327), Expect = 0.0
Identities = 339/343 (98%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 gcttataacagtgactgcaacctcccccgcctctatacaggatgtcagggctactgcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttataacagtgactgcaacctcccccgcctctatacaggatgtcagggctactgcacc 260
Query: 61 gtgggggctgtgatcagaaaatgactagacacagctggtctcccccccgtggatatttga 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggaggctgtgatcagaaaatgactagacacagctggtctcccccccgtggatatttga 320
Query: 121 ggggagcgagtatttgacaggtgatgatcattaactgtgtcatgaagaatggtcacagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggagcgagtatttgacaggtgatgatcattaactgtgtcatgaagaatggtcacagga 380
Query: 181 atcttcctatggaaccttgtaaggagagcatagagtgtagctgtctaggtagctagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcttcctatggaaccttgtaaggagagcatagagtgtagctgtctaggtagctagaaag 440
Query: 241 atgctaaaattgtttctcttattagtttgccctgtccgtgaaaataattagcagctgata 300
|||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgctaaaattgtttc-catattggtttgccctgtccgtgaaaataattagcagctgata 499
Query: 301 gcttagttagtgggggagttttcagaatttggtccccttaact 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcttagttagtgggggagttttcagaatttggtccccttaact 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 745
Length adjustment: 9
Effective length of query: 337
Effective length of database: 736
Effective search space: 248032
Effective search space used: 248032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_g21.g1 MSMg01no391_g21.g1 CHROMAT_FILE:
MSMg01no391_g21.g1 PHD_FILE: MSMg01no391_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:38 2005
(345 letters)
>mm_chr3_51672481_51673225
Length = 745
Score = 656 bits (339), Expect = 0.0
Identities = 342/343 (99%)
Strand = Plus / Minus
Query: 1 cttgttgagaaagaggacattttgagtaaacagtggaataaaaatatccctgggccctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cttgttgagaaagaggacattttgagtaaacagtggaataaaaatatccctgggccctgg 484
Query: 61 aaggggaagctctctgaagtgtctctcctcccacctcgtccttcccagaaaacaaacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaggggaagctctctgaagtgtctctcctcccacctcgtccttcccagaaaacaaacaga 424
Query: 121 gaacccagggcttggccacggcttgctatacattggccgtcctcgctggtaggaatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaacccagggcttggccacggcttgctatacattggccgtcctcgctggtaggaatctcc 364
Query: 181 agctgggaatgacacagatcatagcaaatcttttcatctgttcacttccttccgagtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agctgggaatgacacagatcatagcaaatcttttcatctgttcacttccttccgagtgat 304
Query: 241 tctttctcctttctcacctccctcctttgtttctttacagctataaataaaatcccatta 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tctttctccttcctcacctccctcctttgtttctttacagctataaataaaatcccatta 244
Query: 301 gaaaaatcagaaaataacacagggtcatgtctacagatgcgtt 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gaaaaatcagaaaataacacagggtcatgtctacagatgcgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
