Query= MSMg01no392_p21.b1 MSMg01no392_p21.b1 CHROMAT_FILE:
MSMg01no392_p21.b1 PHD_FILE: MSMg01no392_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:43 2005
(430 letters)
>mm_chr3_5092605_5093434
Length = 830
Score = 801 bits (414), Expect = 0.0
Identities = 426/430 (99%)
Strand = Plus / Plus
Query: 1 atttttatagcgtttgtggcagcataactttggcatgaggatttacttctagtaacggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttttatagcgtttgtggcagcataactttggcatgaggatttacttctagtaacggaa 260
Query: 61 ctttaaactttgttgctatagttttgagaacaaacaaaaactgtaaatgaaagataagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttaaactttgttgctatagttttgagaacaaacaaaaactgtaaatgaaagataagga 320
Query: 121 tgaaattgccttgttctggtgccacgttctgggtctcttagtgtcccatgttaactaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaattgccttgttctggtgccacgttctgggtctcttagtgtcccatgttaactaggg 380
Query: 181 aaaacagtatcagaaaataatgaaccagtttacaaatgggtgacagtaattatatatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacagtatcagaaaataatgaaccagtttacaaatgggtgacagtaattatatatctg 440
Query: 241 gtctctgtttcaaaagttacaagataaaaatggattgccttaaaagatcttaaagtataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctctgtttcaaaagttacaagataaaaatggattgccttaaaagatcttaaagtataa 500
Query: 301 aagcgaaagtcttaaatgagagaagctaaaatccagctctccattttctcacatcagagt 360
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtgaaagtcttaaatgacagaagctaaaatccagctctccattttctcacatcagagt 560
Query: 361 tctgctgagttctttgatccagcccgcatctctggcctcacttcaggagacacagaagag 420
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 561 tctgctgagttctttgatccagcccgcatctctggcttcacttcagaagacacagaagag 620
Query: 421 catccttttc 430
||||||||||
Sbjct: 621 catccttttc 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_p21.g1 MSMg01no392_p21.g1 CHROMAT_FILE:
MSMg01no392_p21.g1 PHD_FILE: MSMg01no392_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:43 2005
(419 letters)
>mm_chr3_5137878_5138699
Length = 822
Score = 683 bits (353), Expect = 0.0
Identities = 385/397 (96%), Gaps = 3/397 (0%)
Strand = Plus / Minus
Query: 26 cctttgaaccaattctgaggtgatcctgaacatacttctgccatttcctgtttatgtagt 85
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 822 cctttgaaccaattctgaggtgatcctgaatatacttctgccatttcctgtttatgtagc 763
Query: 86 gtggtgttctatcaaaacaaaatgttgagcaactctgaagaacaaaatctgcaccttaga 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gtggtgttctatcaaaacaaaatgttgagcaactctgaagaacaaaatctgcaccttaga 703
Query: 146 gtatcatatacacaggaaagatctctttcttcaaaataaacaggcctatctgtcttaata 205
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gtatcatatacacaggaaagatctctttcttcaaaataaacaggcctatctgtcttaatc 643
Query: 206 atacataaattttcttttataaaagtaaatcattatttttcatagttctaaagaatgatt 265
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 642 atacataaatttccttttataaaagtaaatcattatttttcatagttctaaagagtgatt 583
Query: 266 taatgaacgatttgtgattt---ttctctaaatactttctatgtgttcctattgtatgta 322
||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 582 taaagaatgatttgtgatttcttttctctaaatattttctatgtgttcctattgtatgta 523
Query: 323 actgtataagggccattttgtaaaaaagtttgtagggtgaaagggggtgtccagtacaca 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 actgtataagggccattttgtaaaaaagtttgtagggtgaaagggggtgtccagtacaca 463
Query: 383 gtttaagcagccctacaccacatcaaggtgacatgtc 419
|||||||||||||| ||||||||||||||||||||||
Sbjct: 462 gtttaagcagccctgcaccacatcaaggtgacatgtc 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 822
Length adjustment: 9
Effective length of query: 410
Effective length of database: 813
Effective search space: 333330
Effective search space used: 333330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
