Query= MSMg01no393_i03.b1 MSMg01no393_i03.b1 CHROMAT_FILE:
MSMg01no393_i03.b1 PHD_FILE: MSMg01no393_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:28 2005
(511 letters)
>mm_chr3_7418054_7418964
Length = 911
Score = 919 bits (475), Expect = 0.0
Identities = 499/507 (98%)
Strand = Plus / Minus
Query: 5 gaattcactatccataagcatcttcactttaatgtaatgaaatcatagtaaaataaaaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaattcactatccataagcatcttcactttaatgtaatgaaatcatagtaaaataaaaca 652
Query: 65 tgaacagtgagtgaagatagagaactgtgttccagaaacacactttagagaagtttacct 124
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 651 tgaagagtgagtgaagatagagaactgtgttccagaaacgcactttagagaagtttacct 592
Query: 125 ctagcctgaggaatagtgttctttctagcgacagtctgtaatgggaggaaagggtttgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctagcctgaggaatagtgttctttctagcgacagtctgtaatgggaggaaagggtttgag 532
Query: 185 atctgggatcctgttccaacggaaacaaaggtgaaagagagagatacaacagtggcagtc 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atctgggatcctgttccaatggaaacaaaggtgaaagagagagatacaacagtggcagtc 472
Query: 245 cctgaaatgacagaaggtggactaagtgctgccttggtgctccttctacagataaactcc 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 471 cctgaaatgacagaaggtggactaagtgctgccttagtgctccttctacagataaactcc 412
Query: 305 ccaggaggagatttgttgtacaggggacaaaagtcaagagaaagactaaggaacagcagg 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ccaggaggagatttgttgtactggggacaaaagtcaagagaaagactaaggaacagcagg 352
Query: 365 cgaggccttataggtgtttccgaacactggaaactgacaatcattatgacttttgcctca 424
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cgaggccttataggtgtttctgaacactggaaactgacaatcattatgacttttgcctca 292
Query: 425 taccttaaaatctaaaatttttttatgggctcataaaatggctactgtcttacaagctca 484
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 291 taccttaaaatctaaaatttttctatgggctcatagaatggctactgtcttacaagctca 232
Query: 485 tatctgatggggtattttttctgtaac 511
|||||||||||||||||||||||||||
Sbjct: 231 tatctgatggggtattttttctgtaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_i03.g1 MSMg01no393_i03.g1 CHROMAT_FILE:
MSMg01no393_i03.g1 PHD_FILE: MSMg01no393_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:28 2005
(433 letters)
>mm_chr3_7305218_7306050
Length = 833
Score = 822 bits (425), Expect = 0.0
Identities = 431/433 (99%)
Strand = Plus / Plus
Query: 1 agatcctgagtgagatcacagatttctcttcatcactgagttactgctccagtctcacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatcctgagtgagatcacagatttctcttcatcactgagttactgctccagtctcacgt 260
Query: 61 atatcgatttaaaagagtaaaagctaatacacacaatatttaacaactgtgatatccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatcgatttaaaagagtaaaagctaatacacacaatatttaacaactgtgatatccagt 320
Query: 121 catcatgagacaaacaccatgtcttaaagagctaagcactgctcagtagaaaactttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcatgagacaaacaccatgtcttaaagagctaagcactgctcagtagaaaactttact 380
Query: 181 taaaataaaaagggaaaaaggctagttgacaaacaaaacagatctctgtaaaatgctaag 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaataaaaatggaaaaaggctagttgacaaacaaaacagatctctgtaaaatgctaag 440
Query: 241 atttgaaagtaggaaaaattataattcccaaattgacctccagtttcaaagataatagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgaaagtaggaaaaattataattcccaaattgacctccagtttcaaagataatagag 500
Query: 301 gaaagagaatagttaaattgacaagctcaggatttcatacagggcttcaagcattcattc 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 gaaagagaatagttaaattgacaagctcaggatttcatacagggcttcgagcattcattc 560
Query: 361 cccttttcaagaagtttggtgatagatgtttgctttactgtgttgactccagaagcacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccttttcaagaagtttggtgatagatgtttgctttactgtgttgactccagaagcacag 620
Query: 421 aaagaagaagtga 433
|||||||||||||
Sbjct: 621 aaagaagaagtga 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
