NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTGATCTTTCCAAAACATGAAGGGGTGTTGGATTTTGTCAAAT
GCTTTCTCCGCATCTAAGGAGATGATCATTTGGTTTTTGTCTTTGAGTTT
GTTTATATAGTGGATTACGTTGATGGATTTCTGTATATTAAACCATCCCT
GCATCCCTGAGATGAAGCCTACTTGGTCATGATGGATGATCGTTTTGATG
TGTTCTTGGATTTGATTTGCGAGGATTTTATTGAGGATTTTTGCATCGAT
ATTCATAAGGGAAATTGGTCTGAAGTTCTCTTTCTTTGTTGGATCTTTGT
GTGGTTTAGATATCAGAGTAATTGTGGCTTCATAGAATGAATTGGGTATA
TTACCTTCTGTTTCTATTTTGTGGAATAGTTTGAGAAAAGTTGGAATTAA
GTCTTCTTTGAAGGTCTTATAGAACTCAGCACTAAACCCATCTGATCCTG
GGCTTTTTTTTTTTTTTCCTTTTTTTCTTTCCCCGGGGGGAAACTGGTTA
TGATTGCCTCAATTTTTTCTGCCGAAATATTACTGTTTTTTTTTTTTTTT
TATCCCTCTTTTTCTTTGCAATTAATTGTTTTCTCCCCAAAACTCCCATT
CTTTTTTTTTTTTTATATTATTGACCATTTTCCCTCTTTTTTAATTTTCC
CCCTCATCCCTCTCTTTTTTTTTTTATCAAATTTTTTCTCTTCCCCTTTT
TTTTTTCCTTTCTTTTCCTCCCC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATCAGTGGGTCTCAGTGACAGC
ACGGATTTTAGAGTCTCTTAAGAAACAGCCAGATTCCTACTAATAGCATA
ATCTGACAGAGAGTTGACTTGTTAGCTCAGTGAACTTCCAGGAAGTGGGC
ATGCTGTGTGCACTCCGGTGGAAGTTTGGTTGCAGGCAGATTGCTTACCT
GTACACAGAGCTAACTAAGTGCTCCTGAAAAGATAATCAGCCCTTGTAAT
GCTTGTGTCATATGAACAGAGCTGGAGGAAGAGTAGCTCTAAGTTCTGAA
GCAGGTGTTAAGACATGGAAGGCTGGGAGCTTGCTCTTTGCCATCTTTTA
CAGGATCTTTACACATGTGGGAAGGCAGAATAACTGTGAGCCTATCATGC
ATCCAAATGCCTCAGGTACAGTTGGTACAGTTAGTGGCTCTATTTTGATT
ACATTGGCTGACTTAGATGAGGTTGATACTAATAGTGTTGATAAAGACAG
AGCCATAACTGGGTACCTCTTAGGCATCAGGCTAATACATGTGTTATTCT
CTCCCCAAATCCCTAAGAGGAGAGAGCAATGGTGTTTCCGCGATCTTATG
GACCCTTTTGCCTGACGGCCCCCTCCACGGGGAAAATCTCGAACCCCACT
TTATCCCCCTCCCTTCCCCCTTGGGTTTATCCGTCTCCCTCCTCCATACT
CTTCCTTGTTT

Query= MSMg01no395_h09.g1 MSMg01no395_h09.g1 CHROMAT_FILE:
MSMg01no395_h09.g1 PHD_FILE: MSMg01no395_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:19 2005
         (438 letters)



>mm_chr3_8542849_8543686
          Length = 838

 Score =  801 bits (414), Expect = 0.0
 Identities = 432/438 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcagtgggtctcagtgacagcacggattttagagtctcttaagaaacagccagattcct 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 638 atcagtgggtctcagtgacagcacagattttagagtctcttaagaaacagccagattcct 579

                                                                       
Query: 61  actaatagcataatctgacagagagttgacttgttagctcagtgaacttccaggaagtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 actaatagcataatctgacagagagttgacttgttagctcagtgaacttccaggaagtgg 519

                                                                       
Query: 121 gcatgctgtgtgcactccggtggaagtttggttgcaggcagattgcttacctgtacacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 518 gcatgctgtgtgcactccggtggaagtttggttgcaggcagattgcttaactgtacacag 459

                                                                       
Query: 181 agctaactaagtgctcctgaaaagataatcagcccttgtaatgcttgtgtcatatgaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agctaactaagtgctcctgaaaagataatcagcccttgtaatgcttgtgtcatatgaaca 399

                                                                       
Query: 241 gagctggaggaagagtagctctaagttctgaagcaggtgttaagacatggaaggctggga 300
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||
Sbjct: 398 gagctggaggaagagtagctctaagttctgaagcaggcattaagacatggaaggctgaga 339

                                                                       
Query: 301 gcttgctctttgccatcttttacaggatctttacacatgtgggaaggcagaataactgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gcttgctctttgccatcttttacaggatctttacacatgtgggaaggcagaataactgtg 279

                                                                       
Query: 361 agcctatcatgcatccaaatgcctcaggtacagttggtacagttagtggctctattttga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 278 agcctatcatgcatccaaatgcctcaggtacagttggtacagttagtggctctcttttga 219

                             
Query: 421 ttacattggctgacttag 438
           ||||||||||||||||||
Sbjct: 218 ttacattggctgacttag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space:   355641
Effective search space used:   355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)