Query= MSMg01no397_c15.b1 MSMg01no397_c15.b1 CHROMAT_FILE:
MSMg01no397_c15.b1 PHD_FILE: MSMg01no397_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:30 2005
(449 letters)
>mm_chr3_13946717_13947565
Length = 849
Score = 861 bits (445), Expect = 0.0
Identities = 448/449 (99%)
Strand = Plus / Plus
Query: 1 tattcttgcctccagcttcaattataaaatctcaagggaaataaagcagtccagaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattcttgcctccagcttcaattataaaatctcaagggaaataaagcagtccagaatgga 260
Query: 61 ggagggatacttaattgtgaatgacaaggtgaatatttaacaggctatgtcctgccaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagggatacttaattgtgaatgacaaggtgaatatttaacaggctatgtcctgccaaac 320
Query: 121 ttctcagtccagagcatatttgtaaaataattcgctgtggacaccatttcaaaaggttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctcagtccagagcatatttgtaaaataattcgctgtggacaccatttcaaaaggttaa 380
Query: 181 aaggagtcatttggaatcctccctaaggagcccattctcagttgaaaggaatgaagctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggagtcatttggaatcctccctaaggagcccattctcagttgaaaggaatgaagctaa 440
Query: 241 gtctacaacatagatgattatgaagcccaaaccctcaggattaagctgaaaagcaaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctacaacatagatgattatgaagcccaaaccctcaggattaagctgaaaagcaaagac 500
Query: 301 tgacaataaaactgtctgtggcaaggcaatatatctcctgtgaaaccttctcaattgcat 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 tgacaataaaactgtctgtggcaaggcaatatatctcccgtgaaaccttctcaattgcat 560
Query: 361 gtttccctagtaagtcaaactttctcgctttatcttttctgttgtgaaaagtaaatataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttccctagtaagtcaaactttctcgctttatcttttctgttgtgaaaagtaaatataa 620
Query: 421 ccagtgagctccaaatggcctatcactaa 449
|||||||||||||||||||||||||||||
Sbjct: 621 ccagtgagctccaaatggcctatcactaa 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_c15.g1 MSMg01no397_c15.g1 CHROMAT_FILE:
MSMg01no397_c15.g1 PHD_FILE: MSMg01no397_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:30 2005
(445 letters)
>mm_chr3_14130727_14131571
Length = 845
Score = 731 bits (378), Expect = 0.0
Identities = 417/434 (96%), Gaps = 8/434 (1%)
Strand = Plus / Minus
Query: 1 tacagaagttcctcaaagggaaatattgacttaggcgacatcacaggatacttcagttac 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 433 tacagaagttcctcaaagggaaatattgacttaggcgacatcacagtatacttcagttac 374
Query: 61 agcaacactttagattatcatcgtagacaatgcatcaaaactttttgcaactctaaatat 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcaacactttagataatcatcgtagacaatgcatcaaaactttttgcaactctaaatat 314
Query: 121 ttttactgaaaagtgtaggcaaccataacttttctcagtataaaatatgtgctatagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttttactgaaaagtgtaggcaaccataacttttctcagtataaaatatgtgctatagaaa 254
Query: 181 atttcagtgaaagttgttttatttaatctatcatgactctttcatattaacat------- 233
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 253 atttcagtgaaagttgttcaatttaatctatcatgactctttcatattaacatgccgggg 194
Query: 234 atgagttactgactcctcttattttcaatgagatattttaaaacataggttgaattacct 293
| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 a-gggttaatgactccttttattttcaatgagatattttaaaacataggttgaattacct 135
Query: 294 gatgtgatttagactagaaatgttccatagcttgactaagaagtaggttccagttatagg 353
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 134 gatgtgatttagactagaaatgttccatagcttgaccaggaagtaggttccagttatagg 75
Query: 354 caagagtcaaaagataggcaggctcctacttactttaattacttaggtcaagaaccatag 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 caagagtcaaaagataggcaggctcctacttactttaattacttaggtcaagaaccatag 15
Query: 414 gttctagccaggag 427
||||||||||||||
Sbjct: 14 gttctagccaggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
