CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCATCCCCACTGTCTGGACCACTTGCAATCCCGGTGCTGGGGACAGGG
AAAGAGCAAGATTACTGGGTCTTTGCAGGACTGTAAGATTACCCTATTTA
GCAACTTCAGGCCACTGAGAGACTATCTAGAAGAGTAATATGTATGCATC
TGAATGAAAGCACTCAAGATTATTCTCTGGCCTACAAGCTCATATAAATG
TGTACAGTCACAAACTTTACCATATTTCTACACATGGACATGCACATAAA
CATACAACCATTTACAACTAGGAACCATTACCACACTGCAGTACATCAGG
TTTTCTCATCAGTGAATATCTGAAGCCAAATACCTCCTTAGGGTGGCCTA
AGCTGTAGCCCTTTCCTGAAACGTCATCGCCCATACAACTTTCTGTCTAA
AAGCTCAATGGACACTGTACTGCTATAGACGTTTTGAAAGCCAGGTTCTT
CTCTGGAATTCGCACACTTATTGTGGGTTACATAGTCTTGACCTATCAGA
ACTAAACTCAGTGGTAAAGTGCCAAGTACTCCCACATTATATACATTTGC
CCCAGTAGATATGCAATTGTGATTAACTTACAGATAAATTAGCGCCTTAG
AAACAGATATGTGTGAAGTACCTCCTATTCTGTTGTTCTGGAAGAAAAGA
TAAACAGGGGCTCTTTAATCCTTCCCTTAACAGGTTCCTAAGAACGGAAT
CAAAGAAGCTCCTTTCCTCGTTGCCCCCCCATTAAAGG

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCCAAGGAATACCGAATGGCTGAG
AGGCACCTGAAAAAATGTTCAACATCCTTAATAATCAGAGAAATGCAAAT
CAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAGCCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCCA
CAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCTTCAACAGAGGAATGGATACAAAAAATGT
GGTACATTTACACAATGGAGTACTACAAGCAAGTAAAAAGAATGAATTTA
TGAAATTCCCTAGGCAATGGATGGACCTGGAGGGCATCATCCTAAGTGAG
GTAAGACAATCACAAAAGAACTCCAATGGAATGTACTCACTGATAAGGGG
GTATTANCCCCGGAACTTATGATTAGGGGATATAAAGGACGAATTGGAAA
ACCCTTGAACCGGAAGAAGAAAAAGAACCAAGGGGGGGACCTTTGGTCCT
TCTTTAAATAGGGAAAAACCCCCCTTGGGAGGATTATGAAGAA

Query= MSMg01no400_e08.b1 MSMg01no400_e08.b1 CHROMAT_FILE:
MSMg01no400_e08.b1 PHD_FILE: MSMg01no400_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:31 2005
         (486 letters)



>mm_chr3_24221818_24222704
          Length = 887

 Score =  849 bits (439), Expect = 0.0
 Identities = 475/487 (97%), Gaps = 1/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttgcaatcccggtgctggggacagggaaagagcaagattactgggtctttgcaggact 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 acttgcaatcccggtgctggggacagcgaaagagcaagattactgggtctttgcaggact 260

                                                                       
Query: 61  gtaagattaccctatttagcaacttcaggccactgagagactatctagaagagtaatatg 120
           |||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 261 gtaagattaccctatttagcaacttcaggccactaagagaatgtctagaagagtaatatg 320

                                                                       
Query: 121 tatgcatctgaatgaaagcactcaagattattctctggcctacaagctcatat-aaatgt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tatgcatctgaatgaaagcactcaagattattctctggcctacaagctcatattaaatgt 380

                                                                       
Query: 180 gtacagtcacaaactttaccatatttctacacatggacatgcacataaacatacaaccat 239
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 381 gtacagtcacaaactttaccatatttccccacatggacatgcacataaacatacaaccat 440

                                                                       
Query: 240 ttacaactaggaaccattaccacactgcagtacatcaggttttctcatcagtgaatatct 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 ttacaactaggaaccattaccacactgcagtacatcaggttttctcatcagtgaatacct 500

                                                                       
Query: 300 gaagccaaatacctccttagggtggcctaagctgtagccctttcctgaaacgtcatcgcc 359
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagctacatacctccttagggtggcctaagctgtagccctttcctgaaacgtcatcgcc 560

                                                                       
Query: 360 catacaactttctgtctaaaagctcaatggacactgtactgctatagacgttttgaaagc 419
           |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 561 catacaactttctgtctaaaagctcagtggacactgtactgctatagacattttgaaagc 620

                                                                       
Query: 420 caggttcttctctggaattcgcacacttattgtgggttacatagtcttgacctatcagaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggttcttctctggaattcgcacacttattgtgggttacatagtcttgacctatcagaa 680

                  
Query: 480 ctaaact 486
           |||||||
Sbjct: 681 ctaaact 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 887
Length adjustment: 10
Effective length of query: 476
Effective length of database: 877
Effective search space:   417452
Effective search space used:   417452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)