Query= MSMg01no401_i11.b1 MSMg01no401_i11.b1 CHROMAT_FILE:
MSMg01no401_i11.b1 PHD_FILE: MSMg01no401_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:10 2005
(104 letters)
>mm_chr3_33530936_33531440
Length = 505
Score = 172 bits (89), Expect = 5e-48
Identities = 101/107 (94%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 1 aattcaaatgaaattcttcatcaccccttcaaaa---ataacactgtgattttcatcacg 57
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 201 aattcaaatgaaattcttcatcaccccttcaaaacgca--acactgtgattttcatcacg 258
Query: 58 ttccaaccactcagatggcccctgtctttctggcttcaaatactgag 104
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 259 ttccaaccactcagatggcccctgtctttctgacttcaaatactgag 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 505
Length adjustment: 8
Effective length of query: 96
Effective length of database: 497
Effective search space: 47712
Effective search space used: 47712
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no401_i11.g1 MSMg01no401_i11.g1 CHROMAT_FILE:
MSMg01no401_i11.g1 PHD_FILE: MSMg01no401_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:10 2005
(506 letters)
>mm_chr3_33654365_33655270
Length = 906
Score = 331 bits (171), Expect = 8e-95
Identities = 171/171 (100%)
Strand = Plus / Minus
Query: 336 ctatttgtatatcttacgatcaacttcattttgcccttacaattagttctcctttctgta 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ctatttgtatatcttacgatcaacttcattttgcccttacaattagttctcctttctgta 649
Query: 396 cctactgatgatgtgaggattttctttttcaattattgtaaagtctctgctctgaattga 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 cctactgatgatgtgaggattttctttttcaattattgtaaagtctctgctctgaattga 589
Query: 456 agttttccatctctctccaaccactttcttctacccagttatgaagcctaa 506
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agttttccatctctctccaaccactttcttctacccagttatgaagcctaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
