NTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCGAGAGACAGCGC
GGAATTCTTTCTGTTGCACAACAATAAACTCATGAAAATTCTAGAAATAA
TGCATGACAGCGATTGCAACCGAGCTATCCATCATCGTTGGCCATTAAAC
TAAAAACAGAAAAGCTACTAAGAAGTATGCTATAAGTTAAAAACAATATT
TAGCATAGGTGTAATAATTGTAAATGGATAGGGTATATGAATTTTGGCTG
CTGGGAGGAGCCTCTCAGAAGACTGTTATGGTAGGCTCTGTCTGAAAGCA
TAACAGAGTATCATTAATTGTTTTCTGGATTTGTTCTTACCCATGGGATG
AATCTCAATTTGGGGCAGTCATTGATTGCCCATTTCCACCAGCTCTGTTG
CATCTTTGCCTTTGCATAACTTGTAGACAGGACACATTTTTAGTCGAAAG
ATTTGTGGGTGGGTTGCTGTCCTTATCCCTCCACTGGGAGTCCTGCCTGG
TTAGAAAGTGGCCACTTCAGTATCCATAAGCCCCATTGCTAGGAGTCTCA
GCTAGGGTCACACCCATAGACACCCTTGGCGTCCCCCATCTCATCCTGGG
TTTCTGGCACATCCTAAAGATCCCCTTCTGTGAATTTCCATTCCTCTTTC
TCCTGTTTTTCCTACCCCTGATTCCCCCACCTCGCTGCCCCCCTCCTTAT
CCCCTCCCCCACCCCGTTAGTTTCCCTCTTCTTACCTCCTCTTATAA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTTCCCGCGAAATTCAACTGGAGAAACAAGCAGAACTAC
CTCCCCAAACTCTGCTTTGTGATCTTAGGACCACAAGGCCCCTCCTCATA
ACCAATGTACAGAAAAATAATTAATGTTCCTGAAAATGTGGCCCTGAGGT
TGTAGCTTTCTATCATCCTAGAACCTGTGAGAAAGGCAAAGATCCAGACC
TCTACCTACACCTACTGATTCTGCAATGCTAGAGATTGAGTCCAGTATTC
TGTTTAAGGGTGTAGCCTGGTGATTATGATATTTGCCACACTTTACTATT
AACATTTCTGATAGGAATTTTGAATGTATTTGGCCTGATGGCCACAGGCT
TAGAAGAACCAATCCACTGCTGGGTTTAAAAGAAATGATCATTCTTTCTC
ACTCCAAAGAATAATTCTTCACCACAACTGATAATCCAAAGAATTCTCAC
TGGAGAATGGCCATACCCAGTCATTTACACATCTATGGCAGTTTCTTGCC
ACATGGTGNCATTAGAAGTTTAACACAGACCACGTTTCCTAGAGAGCTGA
AAGTAAATATCAAAGAACATTATTGATCCCTATCATCTTCCCTTTATAAA
TATAATCTACTTGGNAGAAATTATATGGCTCCCTTACAAGTGGAGTTTTA
GGCACCAATTATAATTACTAATAATGAATGTCATAACAAAAATGACTTGG
CTTTTT

Query= MSMg01no401_i17.g1 MSMg01no401_i17.g1 CHROMAT_FILE:
MSMg01no401_i17.g1 PHD_FILE: MSMg01no401_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:12 2005
         (576 letters)



>mm_chr3_64416804_64417779
          Length = 976

 Score =  986 bits (510), Expect = 0.0
 Identities = 515/517 (99%)
 Strand = Plus / Minus

                                                                       
Query: 60  ccacaaggcccctcctcataaccaatgtacagaaaaataattaatgttcctgaaaatgtg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 ccacaaggcccctcctcataaccaatgtacagaaaaataattaatgttcctgaaaatgtg 917

                                                                       
Query: 120 gccctgaggttgtagctttctatcatcctagaacctgtgagaaaggcaaagatccagacc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 gccctgaggttgtagctttctatcatcctagaacctgtgagaaaggcaaagatccagacc 857

                                                                       
Query: 180 tctacctacacctactgattctgcaatgctagagattgagtccagtattctgtttaaggg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tctacctacacctactgattctgcaatgctagagattgagtccagtattctgtttaaggg 797

                                                                       
Query: 240 tgtagcctggtgattatgatatttgccacactttactattaacatttctgataggaattt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgtagcctggtgattatgatatttgccacactttactattaacatttctgataggaattt 737

                                                                       
Query: 300 tgaatgtatttggcctgatggccacaggcttagaagaaccaatccactgctgggtttaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgaatgtatttggcctgatggccacaggcttagaagaaccaatccactgctgggtttaaa 677

                                                                       
Query: 360 agaaatgatcattctttctcactccaaagaataattcttcaccacaactgataatccaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agaaatgatcattctttctcactccaaagaataattcttcaccacaactgataatccaaa 617

                                                                       
Query: 420 gaattctcactggagaatggccatacccagtcatttacacatctatggcagtttcttgcc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaattctcactggagaatggccatacccagtcatttacacatctatggcagtttcttgcc 557

                                                                       
Query: 480 acatggtgncattagaagtttaacacagaccacgtttcctagagagctgaaagtaaatat 539
           |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 556 acatggtggcattagaagtttaacacagaccacgtttcctatagagctgaaagtaaatat 497

                                                
Query: 540 caaagaacattattgatccctatcatcttccctttat 576
           |||||||||||||||||||||||||||||||||||||
Sbjct: 496 caaagaacattattgatccctatcatcttccctttat 460


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)