Query= MSMg01no401_p06.b1 MSMg01no401_p06.b1 CHROMAT_FILE:
MSMg01no401_p06.b1 PHD_FILE: MSMg01no401_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:42 2005
(207 letters)
>mm_chr3_14955125_14955730
Length = 606
Score = 369 bits (191), Expect = e-107
Identities = 203/207 (98%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 1 gttgaactaaataaggtctctcatacaaattctctaccttcaggtattctgttataggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttgaactaaataaggtctctcatacaaattctctaccttcaggtattctgttataggaa 260
Query: 61 tgagaaactgagacaagcacccatcagtcattaataataactttttttgctagtaacatt 120
|||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 261 tgagaaactgagacaaacacccatcagtcattaataataactttttt-gttagtaacatt 319
Query: 121 tccaattcctaaattaactatagaagaacttttattcaaattgctcttgacaaaatggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccaattcctaaattaactatagaagaacttttattcaaattgctcttgacaaaatggct 379
Query: 181 gttaatttcatatgtatcgctatggaa 207
||||||||||||||||| |||||||||
Sbjct: 380 gttaatttcatatgtattgctatggaa 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 606
Length adjustment: 9
Effective length of query: 198
Effective length of database: 597
Effective search space: 118206
Effective search space used: 118206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_p06.g1 MSMg01no401_p06.g1 CHROMAT_FILE:
MSMg01no401_p06.g1 PHD_FILE: MSMg01no401_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:42 2005
(326 letters)
>mm_chr3_15185195_15185924
Length = 730
Score = 580 bits (300), Expect = e-170
Identities = 321/330 (97%), Gaps = 4/330 (1%)
Strand = Plus / Minus
Query: 1 ctcttggatgttgcatggatgacaaactacaggaggtgggctgtggaaacagat----ac 56
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 454 ctcttggatgttgcatggatgacaaactacaggaggtgggctgtggaaacagatactcac 395
Query: 57 ctgcaggcttctgagaaggttcacatggtaggggacagatgtcttggaatctggtgtccc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctgcaggcttctgagaaggttcacatggtaggggacagatgtcttggaatctggtgtccc 335
Query: 117 ttgcagtcaaggtggtgagaaaaggttacatctgtgggtatactgtacatgtctatctgc 176
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 334 ttgcagtcaaggtggtgagaaaaggttacatctgtgggtatattgtacatgtctatctgc 275
Query: 177 cctacagaccacaggttccttaacagttggattccacttgatgggaaatagttacagaag 236
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 274 cctacagaccacaggttccttaacagttgaattccacttgataggaaatagttacagaag 215
Query: 237 aaatacttgttaacaaatggctcaactgttaagagcactgactacttttgtgtagatcct 296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 214 aaatacttgttaacaaatggctcagctgttaagagcactgactacttttgtgtagatcct 155
Query: 297 gaattcaattcccagcaatcacatggtggc 326
|| |||||||||||||||||||||||||||
Sbjct: 154 gagttcaattcccagcaatcacatggtggc 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 730
Length adjustment: 9
Effective length of query: 317
Effective length of database: 721
Effective search space: 228557
Effective search space used: 228557
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
