Query= MSMg01no403_e08.b1 MSMg01no403_e08.b1 CHROMAT_FILE:
MSMg01no403_e08.b1 PHD_FILE: MSMg01no403_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:30 2005
(466 letters)
>mm_chr3_127240978_127241843
Length = 866
Score = 826 bits (427), Expect = 0.0
Identities = 445/459 (96%), Gaps = 13/459 (2%)
Strand = Plus / Minus
Query: 8 ttcctggttgggaacatatcattagttgctaggctagccagaatttttattcttgccatt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ttcctggttgggaacatatcattagttgctaggctagccagaatttttattcttgccatt 807
Query: 68 tgtaaacagtgctttaattgaatcctgtcatgagctcctgtcaacagatatgacagcaga 127
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 806 tgtaaacagtgctttaattgaa-------------tcctgtcaacagatatgacagcaga 760
Query: 128 tttgtttcatgggttgaaacaaaggttccaggtacctcatgctgacctcagacttactgt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tttgtttcatgggttgaaacaaaggttccaggtacctcatgctgacctcagacttactgt 700
Query: 188 gtgcctgagaaaggctgtgtacttctgatcccctaaaactaaaatataacttttttttct 247
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 699 gtgcctgagaaaggctgtgtacttctgatcccctaaaactataatataacttttttttct 640
Query: 248 ctgctaaggaaactttttgctggctgtctgcacctgcagtcccagctattcaggaggcag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctgctaaggaaactttttgctggctgtctgcacctgcagtcccagctattcaggaggcag 580
Query: 308 aagagtgatcttcaggccagcttgcattacacagagacccactgcagaaaagcagtagca 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aagagtgatcttcaggccagcttgcattacacagagacccactgcagaaaagcagtagca 520
Query: 368 actgctttgggcatgtttcaatctgttgtcttctgtgtttcaaaaaagtcttattttctc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 actgctttgggcatgtttcaatctgttgtcttctgtgtttcaaaaaagtcttattttctc 460
Query: 428 ctttaaaaaaatacatatatcttgtattttatataatat 466
|||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctttaaaaaaatacatatatcttgtattttatataatat 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_e08.g1 MSMg01no403_e08.g1 CHROMAT_FILE:
MSMg01no403_e08.g1 PHD_FILE: MSMg01no403_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:30 2005
(447 letters)
>mm_chr3_127035450_127036296
Length = 847
Score = 833 bits (431), Expect = 0.0
Identities = 443/451 (98%), Gaps = 8/451 (1%)
Strand = Plus / Plus
Query: 1 acttgggttaataaccaataaaacctcatactgatagcatatgtataaataattatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgggttaataaccaataaaacctcatactgatagcatatgtataaataattatgatt 260
Query: 61 ctcagaatagttactacccagaaatgcctggttttaaatataaattttaattagttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagaatagttactacccagaaatgcctggttttaaatataaattttaattagttaata 320
Query: 121 cttaaaattaacataatattaaacaggagatgggagatggggaaggacagagcatcctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaaaattaacataatattaaacaggagatgggagatggggaaggacagagcatcctag 380
Query: 181 atactcaaagatgtgcgtgcaacaagaactaaagacctgcagaatgaccacagcaacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactcaaagatgtgcgtgcaacaagaactaaagacctgcagaatgaccacagcaacaca 440
Query: 241 attgtttt----agacttcctgactgcatgagagaaataagcaaaagaatgtcttcattg 296
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attg----ggcaagacttcctgactgcatgagagaaataagcaaaagaatgtcttcattg 496
Query: 297 tgctaatctatacatttctcataagtaatacagaaatgtctttagaaatccaggtgattt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgctaatctatacatttctcataagtaatacagaaatgtctttagaaatccaggtgattt 556
Query: 357 ttacacagtgatgttcaacttatatttgtacagctgaaaataaggatgcttgatgctact 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttacacagtgatgttcaacttatatttgtacagctgaaaataaggatgcttgatgctact 616
Query: 417 aaacatcatttaaaattgtcttagcttggtt 447
|||||||||||||||||||||||||||||||
Sbjct: 617 aaacatcatttaaaattgtcttagcttggtt 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
