NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATATTGGATATTATTC
CCCTATCTGATTTAGGATAGGTAAAGATACTTTCTCAATCTGTTGGTGGT
CTTTTTGTCTTATTATCGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTT
TATGAGGTCCCATTTGTCTATTCTCGATCTTACAACACAAGCCATTGCTG
TTCTATTCAGGAATTTTCCCCCTATGCACATATCTTCGAGGCTTTTCCCC
ACTTTCTCCTCTATATGTTTCAATGTCTCTGGTTTTATGTGGAGTTCCTC
GATCCACTTAGATTTGACCTTAGTACCAGGAGATAGGAGTGGATCAATTC
TCATTGTTCTACATGATAACCACCAGTTGTGCCAGCACCATTTGTTGAAA
ATGCTGTCTTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCC
AGTGACCATAAGTGTGTAAGTTCATTTCTGGGNCTTCACTTCTATTCCAT
TGGGCTACTTGTTTGTCGCTATACACGAACTGGGCAAAAAAAGTCCAGAA
CAAAAGGGGTTTAAGGGGAAATTTTTATCAACCTTTAAAAGAAAAATTAA
TCCGGGTTTTTTCAAA

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAATATGGCAATTTCTCAGAAAAT
TATAAATAGATCTATCTGAAGACTCTGGGCATATACCCAAAGGACACTCG
GTTCTATTGCAAGGACTTGTTCAGCTATGCTCACAGCAGCCTTATTTATA
ATAGCCAGAAACTAGAAACAAGTAGATGTCCCTCAACAGGAGAACAGACA
AATAAAATGTAGTCATTTATACAACAGAGAATTACTCAACTGTAAAAAAC
AGTGGCATCATGATTTTGCAAGCAGATTTTTTGGAATTAAAAAAATAATC
CTGAGTGAGGAAACCCAGACCCAGAAAGTCAAACATGGTATGTATAATAA
CCATAAAGTAAAAATGATGCTACCATCCACAGAAAGTGTTTTTAATAAGA
AAACTCAAATTTCAGCACAAGCTACCTTTCTGCTAATTATAGATCTGGCC
ACATTGTTATAAGTGTAAAACAACTTTGAAACAAATAATGAAGTTTAAAG
TTAAACACTATTTCAAGACTTCTCAAAAGTTGTAATAAAGCAAGTGCTAT
GATATCAAGGAAGAAAAATAGGTCAATGAGACAGGAAGAAATTGTATTCC
AGATTTATCAAATAACTTTTAGTCTGATAAGAATTTTAGTTTAGAAATGA
TGATCTAAAGAATATATAACATGTTACTAGAG

Query= MSMg01no403_f03.g1 MSMg01no403_f03.g1 CHROMAT_FILE:
MSMg01no403_f03.g1 PHD_FILE: MSMg01no403_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:34 2005
         (497 letters)



>mm_chr3_61882409_61883305
          Length = 897

 Score =  953 bits (493), Expect = 0.0
 Identities = 496/497 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatatggcaatttctcagaaaattataaatagatctatctgaagactctgggcatatacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatggcaatttctcagaaaattataaatagatctatctgaagactctgggcatatacc 260

                                                                       
Query: 61  caaaggacactcggttctattgcaaggacttgttcagctatgctcacagcagccttattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 caaaggacactcggttctattgcaaggacttgttcagctatgctcacagaagccttattt 320

                                                                       
Query: 121 ataatagccagaaactagaaacaagtagatgtccctcaacaggagaacagacaaataaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatagccagaaactagaaacaagtagatgtccctcaacaggagaacagacaaataaaa 380

                                                                       
Query: 181 tgtagtcatttatacaacagagaattactcaactgtaaaaaacagtggcatcatgatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagtcatttatacaacagagaattactcaactgtaaaaaacagtggcatcatgatttt 440

                                                                       
Query: 241 gcaagcagattttttggaattaaaaaaataatcctgagtgaggaaacccagacccagaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaagcagattttttggaattaaaaaaataatcctgagtgaggaaacccagacccagaaa 500

                                                                       
Query: 301 gtcaaacatggtatgtataataaccataaagtaaaaatgatgctaccatccacagaaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcaaacatggtatgtataataaccataaagtaaaaatgatgctaccatccacagaaagt 560

                                                                       
Query: 361 gtttttaataagaaaactcaaatttcagcacaagctacctttctgctaattatagatctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttttaataagaaaactcaaatttcagcacaagctacctttctgctaattatagatctg 620

                                                                       
Query: 421 gccacattgttataagtgtaaaacaactttgaaacaaataatgaagtttaaagttaaaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccacattgttataagtgtaaaacaactttgaaacaaataatgaagtttaaagttaaaca 680

                            
Query: 481 ctatttcaagacttctc 497
           |||||||||||||||||
Sbjct: 681 ctatttcaagacttctc 697


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)