Query= MSMg01no403_j02.b1 MSMg01no403_j02.b1 CHROMAT_FILE:
MSMg01no403_j02.b1 PHD_FILE: MSMg01no403_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:54 2005
(468 letters)
>mm_chr3_67941888_67942755
Length = 868
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 17 gaattccagagagtacggccaggaggaagcaagattattaaggaaagaaactccaagaaa 76
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaattccagagaggagggccaggaggaagcaagattattaaggaaagaaactccaagaaa 609
Query: 77 ctgaatataattttgaattcaggataaataccgaggaccggaaacacgacagattcttat 136
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 608 ctgaatataattttgaattcaggataaataccgaggaccggacacacgacagattcttat 549
Query: 137 caagtctctattcgtgcatctcaggaaattgatttgcacattctgagttcacagctatct 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 caagtctctattcgtgcatctcaggaaattgatttgcacattctgagttcacagctatct 489
Query: 197 ggttttgtataatgtcaccttcctgtgctctaatgactaagatgaatgtcctcagccctg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggttttgtataatgtcaccttcctgtgctctaatgactaagatgaatgtcctcagccctg 429
Query: 257 gctagttggattagtcatttccttatttttgttctgtactggtgttgggaggctcagcac 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gctagttggattagtcatttccttatttttgttctgtactggtgttgggaggctcagcac 369
Query: 317 aaggcagatgttgtattcagaagagtgtcaatgatatgtgccctctgacagacttccagg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaggcagatgttgtattcagaagagtgtcaatgatatgtgccctctgacagacttccagg 309
Query: 377 gagcaaattccagggtcccttttcatggttttagaagatttattctgtttttagaagcac 436
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 308 gagcaaattccagggtcccttttcatggttttagaagatttactctgtttttagaagcac 249
Query: 437 tttttcaatatatctggcgtgtgtatggaggg 468
||||||||||||||||| ||||||||||||||
Sbjct: 248 tttttcaatatatctggtgtgtgtatggaggg 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_j02.g1 MSMg01no403_j02.g1 CHROMAT_FILE:
MSMg01no403_j02.g1 PHD_FILE: MSMg01no403_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:54 2005
(329 letters)
>mm_chr3_67762074_67762802
Length = 729
Score = 601 bits (311), Expect = e-176
Identities = 327/337 (97%), Gaps = 8/337 (2%)
Strand = Plus / Plus
Query: 1 agtttccatcatccatgtagggtggttggttcacctgtaactctgggatcgaacaccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agtttccatcatccatgtagggtggttggttcacctgtaactctgggatcgaacaccctc 252
Query: 61 ttcttgatttttggaatactgctcacatatcacacacacacacacacacacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcttgatttttggaatactgctcacatatcacacacacacacacacacacacacacaca 312
Query: 121 cacac--------gctcacacgtgtgcacacacacactttgaaagttttcaagaaataaa 172
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cacacacacacacgctcacacgtgtgcacacacacactttgaaagttttcaagaaataaa 372
Query: 173 ggaaacaaaaattgctagcctccaatccaaatccactgaatcagacttgaattatagtga 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 373 ggaaacaaaaattgctagcctccaatccaaatccactgaatcagacttgaattagagtga 432
Query: 233 ggggagacctaagtgcccatccttttccaagttaatgcaagctatggcctgggaagcccc 292
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggggagacctaagtggccatccttttccaagttaatgcaagctatggcctgggaagcccc 492
Query: 293 agttcatgatgtttctgaacatataactatgctcagt 329
|||||||||||||||||||||||||||||||||||||
Sbjct: 493 agttcatgatgtttctgaacatataactatgctcagt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
