Query= MSMg01no404_i01.b1 MSMg01no404_i01.b1 CHROMAT_FILE:
MSMg01no404_i01.b1 PHD_FILE: MSMg01no404_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:12 2005
(279 letters)
>mm_chr3_79219992_79220670
Length = 679
Score = 501 bits (259), Expect = e-146
Identities = 271/275 (98%)
Strand = Plus / Minus
Query: 5 gaattctcattttcttgcaaacatactttttttccccagatattcaatcaagtgattcag 64
||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 338 gaattctcattttctagtaaacatacttttttcccccagatattcaatcaagtgattcag 279
Query: 65 gggattgctggtgagggatttctttttaaagtataatcaagactctaaaaatcctttgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gggattgctggtgagggatttctttttaaagtataatcaagactctaaaaatcctttgaa 219
Query: 125 ttttaaaaagatttgcctagtgtggtaggcttgtaatgccagttacttagggggctgagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttttaaaaagatttgcctagtgtggtaggcttgtaatgccagttacttagggggctgagg 159
Query: 185 caggagaatcataatttctacttctgcctaggctgcagagtgcctaggttagtataaaca 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 158 caggagaatcataatttctacttctgcctaggctgcagagtgcctaggctagtataaaca 99
Query: 245 acttagtgagaccttggccccagacaaaaagttga 279
|||||||||||||||||||||||||||||||||||
Sbjct: 98 acttagtgagaccttggccccagacaaaaagttga 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no404_i01.g1 MSMg01no404_i01.g1 CHROMAT_FILE:
MSMg01no404_i01.g1 PHD_FILE: MSMg01no404_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:12 2005
(332 letters)
>mm_chr3_79052162_79052891
Length = 730
Score = 615 bits (318), Expect = e-180
Identities = 328/332 (98%), Gaps = 2/332 (0%)
Strand = Plus / Plus
Query: 1 atgccaaaggatggatatctaccactaatcctcaggttgtcaaagaaaacgcaggtcgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgccaaaggatggatatctaccactaatcctcaggttgtcaaagaaaacgcaggtcgga 260
Query: 61 agagtcagccgtctgagaagataaggcactgactgaagggtccggagtacaaggataaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagtcagccgtctgagaagataaggcactgactgaagggtccggagtacaaggataaac 320
Query: 121 cggtaaggaaacagtaggatttaatacaatccaagcttggttaatgaaatacgccaatgg 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 cggtaaggaaacagtaggatttaatacaatccaagcttggttaacgaaatacgccaatgg 380
Query: 181 ccatcttaataattcttcaacagcttacattctgtacctaatgtgaatccataaaagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatcttaataattcttcaacagcttacattctgtacctaatgtgaatccataaaagtta 440
Query: 241 gggtgtcccatgaatcacttataaactcatagccacactggatttccaacattgtacgca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 gggtgtcccatgaatcacttataaactcatagccacactggatttccaacattgtat--a 498
Query: 301 cttagtatatatatgtattgcatgcttgctga 332
||||||||||||||||||||||||||||||||
Sbjct: 499 cttagtatatatatgtattgcatgcttgctga 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 730
Length adjustment: 9
Effective length of query: 323
Effective length of database: 721
Effective search space: 232883
Effective search space used: 232883
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
