NNTTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGN
GNGGAATTCCCATATTTCTTCCCTGACCTGTGGAGTGAGGGCTGTCATGG
TTGAAAGGACCAGGTGGGAAGCCTTCAGAGTTGCCGTTGCCAAGGGAACT
AGTGAGCAAAAGACAATATTGCATCTCAGGAGGAACTGCAGAAGTTAGTG
CCACCATCAAGGACTTGAAAGGTTTGGGGGTGATGACTCCCATCACTTCC
CTTATCCCTCCTTTCTGGCCAGTGGGAAAGATAGATGTACCATGAAGAAT
GACTGTTGACTTCTGAAACTCATGTCATGACTTCAGTTGTCGCTGCTGTA
CCAGATGTGGTGTGACTGCCAGATCTACCAACAGCAGAGACCAACACTGA
GCCACAGATCCTTTCTCTGTGGAATGGACAACACTTTGTCCTTCAGAGAG
TAGATAATTTATCTATGAATTTACCTCTCCCTCATATAGTGCTTCTGCCA
AAATCACCATCTGTGAACTTACAGAATGCCCTATCCACCATCATGGTATT
CTATACAGTACTGCTTCTGACCAAAGAACTCCCTTCACAGCCAGAGAGGT
GTGACAGTGGTCTCACGATCATGCAAAGTACTGGTCTTTCCAAGTTTCCC
ACCATCCCGAAGCAGCTGCCCTGATAGAAAAATGGGATAGGCCTTTTGAT
GGTTTAAACAGGGGCCAATTTTGGGACAAGCCCCCTGGATGGGCCGAAAT
TTTTTCTTAAACACCCTTCT

TTCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCATCAAAACTAATAATGAT
GGGGTAGGGGAGGAGGTTCGGCAGAGTGCATGCTGAGTGTGAGGGACTAA
GTTTGGATTCTTGGCAGCCACAGAAGGCGCTGGGCATTGCAAAAGCACAC
CTGGGGCTCTGAGTACCAAAACATGATGACCTCTAAGTTCAGTGAGAGAC
TGTCTCAAGGGGAAAGGTGGAGAGAGACAGAAGACACTACCCTACCACAT
CTTCCTCAGGCTTCTGCATATGTGAAACAGGTGTGTACACATATACTCTC
ACACATGTTCTGCATATGTGAACAGGTGTGTACACATATACTCTCACACA
TGTTTTGCATATGTGAACAGGTGTGTACACATACACTCTCACACACGCAT
CCCACTCGTAAACTGACAAATGATGACAGAAATAACGTACCCCCATAACT
TGCAAACTATGGCGATGTTCACAGGTGGCTTTATACGCACTCTATGTGTT
TTCTTATGTTTTTCACTTGATCAATTCTTTATCCCTCCCCCTCCTTACTC
TATCCACTGACACTCATTTTTGTCCCACGCACTCTATATTCCTGACGCGT
GTCTTAAGCTCTCCCCCCTTTTATTTTCTCATACTATCGCATTTGCCCAT
TTGTATTCTTCCCCCTCCTATTGTTTGCCCCCCTATTCTTTTCTTTATTG
TCATTACTCCCCTCCTCCN

Query= MSMg01no405_d03.g1 MSMg01no405_d03.g1 CHROMAT_FILE:
MSMg01no405_d03.g1 PHD_FILE: MSMg01no405_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:06 2005
         (358 letters)



>mm_chr3_83737151_83737907
          Length = 757

 Score =  630 bits (326), Expect = 0.0
 Identities = 346/354 (97%), Gaps = 5/354 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   accatcaaaactaataatgatggggtaggggaggaggttcggcagagtgcatgctgagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25  accatcaaaactaataatgatggggtaggggaggaggttcggcagagtgcatgctgagtg 84

                                                                       
Query: 61  tgagggactaagtttggattcttggcagccacagaaggcgctgggcattgcaaaagcaca 120
           |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 85  tgagggactaagtttggattcttggcagccgcagaagccgctgggcattgcaaaagcaca 144

                                                                       
Query: 121 cctggggctctgagtaccaaaacatgatgacctctaagttcagtgagagactgtctcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cctggggctctgagtaccaaaacatgatgacctctaagttcagtgagagactgtctcaag 204

                                                                       
Query: 181 gggaaaggtggagagagacagaagacactaccctaccacatcttcctcaggcttctgcat 240
           ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gggaaaggtggagaga--cagaagacactaccctaccgcatcttcctcaggcttctgcat 262

                                                                       
Query: 241 atgtgaaacaggtgtgtacacatatactctcacacatgttctgcatatgtgaacaggtgt 300
           ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 263 atgtgaa-caggtgtgtacacatatactctcaca--tgttctgcatatgtgaacaggtgt 319

                                                                 
Query: 301 gtacacatatactctcacacatgttttgcatatgtgaacaggtgtgtacacata 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtacacatatactctcacacatgttttgcatatgtgaacaggtgtgtacacata 373



 Score =  149 bits (77), Expect = 2e-40
 Identities = 86/89 (96%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 233 ttctgcatatgtgaaacaggtgtgtacacatatactctcacacatgttctgcatatgtga 292
           ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 478 ttctgcatatgtgaa-caggtgtgtacacatatactctcacacatgttttgcatatgtga 536

                                        
Query: 293 acaggtgtgtacacatatactctcacaca 321
           ||||||||||||||||| |||||||||||
Sbjct: 537 acaggtgtgtacacatacactctcacaca 565


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 2
Length of query: 358
Length of database: 757
Length adjustment: 9
Effective length of query: 349
Effective length of database: 748
Effective search space:   261052
Effective search space used:   261052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)