NGGTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTATCAGGTACCATGAAAGAATTACTTATTTGCATGCTCTCA
TACAGACTCATCTTAGCTAGCAATATTACATATCACAGGATCATCTATCT
TCAGATGGGGCAACCCACAGTGTGGTACTCTCCAGCCCCTAATGTCAGTA
ATCAGGAAAGTCCATCCAGTGGCCAGTCTGTTACAAGTTGTTACCCAGTC
AAGGCTTGGGCTCTAGCATGTCTCAGGGTGATAATTAAAGTTTACTAGGA
CACTATCCAATAAACAAATATTCTTTATATTTTAATCTTTTAAAAAAAGG
TATATTCATTATTTAAATTTCAAATGTAAACCCTTTTTTGGTTTCCCCTA
TGAAAACCCTCTATCCCCTCTCCCATTCCCCTGCTAACCAAACCACTGGC
CCTGGCAATCCCTTATATTGTGGCATAGAGCCTTCACAGGACTGAGGTAC
TCTCCTTCGATTGATGATCAAGTAGGCCACCTTCTGCTACACTTGCAGTT
ATTACTATGAGTCCCACCATGTGTTTTCTTTGGNTGGGGGCTTAACCCAG
GGAGCTCTGTTTGGAGGGACTGGTTGGTTTATATTGTTGTCCTCTTATGA
GGGTGTAATCTTCTGAAAATCCCCCTATGAAGGAATGAACTCCTAGGGTG
GGGAGCCTCCCGAGGGTTCTTTTCTTATTTTTCGTTCCCCCCTTTTTTAT
TTTTTATTTTCCCCCN

TTCGATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAAGAATAACAAATGG
CTGATAAGCACCTGAGAAAATATTCAGCATCCTTAGTCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCTGCCAGAATGGCTAA
GATCAAAATTTCAGGTGACAGCAGATACTGGCGAGGGTGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGAATTGCAAGCTTGTACAACCACTCTGG
AAATCAGTCTGGTGGTTCCTCAGATTATTGGACATAGTACTACTTGAGGA
TCCAGCAATACCGCTCCTGGGCATATATCCAGAAGACGTTCCAACCAGTA
AGAAGGACATGTGCTAAACTATGTTCATAGCAGCCTTATTTGTAATAGCC
AGAGGCTGGAAAGAACCCAGATGCCCCCAATGAGGAATTGATACAGAAAA
TGTAGTTCTTTTACATAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGGTAAATGGATGGACTTGAAGGGTATCATCCTGAG
TGAGGTAACCCAATCACCAAAGAACTCACATGAAATGGACTCACTGATAA
CTCCATTTTATCCCTGAAACTTAGTAATACCCATGATTCCCTATACTTTT
TGCTTTACCCATGTTCTCTTAATTATAATGTACAACTTTATTGCGGACCC
N

Query= MSMg01no405_o08.b1 MSMg01no405_o08.b1 CHROMAT_FILE:
MSMg01no405_o08.b1 PHD_FILE: MSMg01no405_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:01 2005
         (485 letters)



>mm_chr3_3382578_3383462
          Length = 885

 Score =  884 bits (457), Expect = 0.0
 Identities = 478/485 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attacttatttgcatgctctcatacagactcatcttagctagcaatattacatatcacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacttatttgcatgctctcatacagactcatcttagctagcaatattacatatcacag 260

                                                                       
Query: 61  gatcatctatcttcagatggggcaacccacagtgtggtactctccagcccctaatgtcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcatctatcttcagatggggcaacccacagtgtggtactctccagcccctaatgtcag 320

                                                                       
Query: 121 taatcaggaaagtccatccagtggccagtctgttacaagttgttacccagtcaaggcttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcaggaaagtccatccagtggccagtctgttacaagttgttacccagtcaaggcttg 380

                                                                       
Query: 181 ggctctagcatgtctcagggtgataattaaagtttactaggacactatccaataaacaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctctagcatgtctcagggtgataattaaagtttactaggacactatccaataaacaaa 440

                                                                       
Query: 241 tattctttatattttaatcttttaaaaaaaggtatattcattatttaaatttcaaatgta 300
           |||||  || ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 tattcagtacattttaatcttttaaaaaaaggtattttcattatttaaatttcaaatgta 500

                                                                       
Query: 301 aacccttttttggtttcccctatgaaaaccctctatcccctctcccattcccctgctaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacccttttttggtttcccctatgaaaaccctctatcccctctcccattcccctgctaac 560

                                                                       
Query: 361 caaaccactggccctggcaatcccttatattgtggcatagagccttcacaggactgaggt 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaccactggccctggcaatccctaatattgtggcatagagccttcacaggactgaggt 620

                                                                       
Query: 421 actctccttcgattgatgatcaagtaggccaccttctgctacacttgcagttattactat 480
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 actctcctccgattgatgatcaagtaggccaccttctgctacacttgcagttatttctat 680

                
Query: 481 gagtc 485
           |||||
Sbjct: 681 gagtc 685


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)