NCCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTGACTTATTCAATGACCATCCAGAGACTGACCCACCTGGG
GATCCTTCCCATATAGTCACCAAACCCAGACACTACTGTGGATGCCAACA
AGTACTTGTGGACAGTAGCCTGATATAGCTGTCTCCTAGAGGCTTTGCCA
GTGCCTGACAAATACAGAAGTCATCCATTGGACTGAGCATAGGGTCCCTA
ATGAAGGAACTAGAAAAAGGACCTAAGGAGTTGAAGGGGTTTGCAGTCCC
ATAGAAGGAACAACAACATGAACTAAACAGCACCCCCAGAGCTCCCTGGG
ACTAAACCACAAACAAAAGAGTACACATGGTGGGACAAATTGCTCCAGCT
GCATATCAAGCAGAGGATGGCCTAGACAGATATCAATGGGAGGAGAGGCC
CTTTGTCCTCTGAAGGCTCTATGCCCCAGTGTAGAGAAATGCTAGGACCA
GGAAGCAGGAGAGGGTGGGTTGGTGAGGAGGTGTCATATTATGTCTTATT
TTTAGTTNCTTTTTCTTCTTTCTCTTTTCTTTTTTTTCCTTCTCCCCCTT
TTTTTTCCCTCTTTTCCTTCTTTTTATCTTTTATTCAACTTCCTCCTACT
TTTTTTTTTCTTTTTCTTATCTTTCCCATCTTTTTTCATCATCATCTTTC
TCTACTCCTCTCCCCTACCCTCTTTTACCTCTTG

NNNTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGATAGAATTTTTGGGGTC
ACTTAAGTACACTATCATATCATCGACAAATAGTGATATTTTGACTTCTT
TCTTTCCAATTTCTATATCTTTATAATTCAGAGATGTATTTCTTAGAATG
TTTTGCTGAGTGTGAAAATAACTCTGATTGATTTATGGAAATTCAAAAGC
TGGGCTTATTTTAAGCGGGTCCTTGAAAACAATGTGCTAAACTTGTATTT
ATATTTAAATAAAACCAATTGTCATATAAGTATCTATATTAATGTAATCT
ATTAAGATATTGAAACCTTCTCCTTACATAATCTGAAATAGATTTTTAAA
ACTCATTTTTTTGAGCCCTGTCTTTCTGTGAACTTTTCTCTTAGATATTA
CCTACTGATGTAAATTACCTTAATTATGTATTTCCTGAGCATTTACAAAA
TGGGCTTCTGCAATTTTTAGTGTCATGATAAGCAGTANATAAGCTTTACA
GAAGTAAGTCCTAGGAAACCTATCTGAAGCAGGCAGAAAGTGAGAGCAGG
AACAGTATTGCAGCACATGGTAAGAACATGTCTGTGGGTATATACTCTGA
GGTTCTTTGGTTNACACACACACACACACACACTATCNNTTANNTTATTA
AAAAATTTGTTTTTCCAAAGCCAGGTTATAAGGGGAAGGGCCTAN

Query= MSMg01no406_h23.g1 MSMg01no406_h23.g1 CHROMAT_FILE:
MSMg01no406_h23.g1 PHD_FILE: MSMg01no406_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:49 2005
         (499 letters)



>mm_chr3_24722295_24723193
          Length = 899

 Score =  920 bits (476), Expect = 0.0
 Identities = 490/495 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   atagaatttttggggtcacttaagtacactatcatatcatcgacaaatagtgatattttg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 atagaatttttggggtcacttaagtacactatcatatcatcgacaaatagtgatattttg 729

                                                                       
Query: 65  acttctttctttccaatttctatatctttataattcagagatgtatttcttagaatgttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 acttctttctttccaatttctatatctttataattcagagatgtatttcttagaatgttt 669

                                                                       
Query: 125 tgctgagtgtgaaaataactctgattgatttatggaaattcaaaagctgggcttatttta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgctgagtgtgaaaataactctgattgatttatggaaattcaaaagctgggcttatttta 609

                                                                       
Query: 185 agcgggtccttgaaaacaatgtgctaaacttgtatttatatttaaataaaaccaattgtc 244
           ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 608 agcaggtccttgaaaacaatgttctaaacttgtatttatatttaaataaaaccaattgtc 549

                                                                       
Query: 245 atataagtatctatattaatgtaatctattaagatattgaaaccttctccttacataatc 304
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 548 atataagtatctatattaatgtaatctattaagatattgaaatcttctccttacataatc 489

                                                                       
Query: 305 tgaaatagatttttaaaactcatttttttgagccctgtctttctgtgaacttttctctta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgaaatagatttttaaaactcatttttttgagccctgtctttctgtgaacttttctctta 429

                                                                       
Query: 365 gatattacctactgatgtaaattaccttaattatgtatttcctgagcatttacaaaatgg 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 428 gatattacctactgatgtaaattaccttaattatgtatttcctgagcatttacaaaattg 369

                                                                       
Query: 425 gcttctgcaatttttagtgtcatgataagcagtanataagctttacagaagtaagtccta 484
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 368 gcttctgcaatttttagtgtcatgataagcagtaaataagctttacagaagtaagtccta 309

                          
Query: 485 ggaaacctatctgaa 499
           |||||||||||||||
Sbjct: 308 ggaaacctatctgaa 294


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)