Query= MSMg01no410_b05.b1 MSMg01no410_b05.b1 CHROMAT_FILE:
MSMg01no410_b05.b1 PHD_FILE: MSMg01no410_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:42 2005
(520 letters)
>mm_chr3_79347025_79347945
Length = 921
Score = 965 bits (499), Expect = 0.0
Identities = 514/519 (99%), Gaps = 1/519 (0%)
Strand = Plus / Minus
Query: 3 cggaattcagaaagta-atcatgacatcgccatggggtgagatgggaagagagtgatgct 61
|||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 cggaattcagaaaggacatcatgacatcgccgtggggtgagatgggaagagagtgatgct 662
Query: 62 taacagtggcagctggagcactaatgctggtggaggaggtgacatccaaggcttgctgtc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taacagtggcagctggagcactaatgctggtggaggaggtgacatccaaggcttgctgtc 602
Query: 122 agtggacaccacctcacacctgcctttatgacagtcctgcacagtccaaatgtccttgca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtggacaccacctcacacctgcctttatgacagtcctgcacagtccaaatgtccttgca 542
Query: 182 aaagtaagaccctggacaagagaagactgagactgacttctaaggtacacatgccacatg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagtaagaccctggacaagagaagactgagactgacttctaaggtacacatgccacatg 482
Query: 242 ctgtggaggaagagttgaggcccagttatagccaggcagttctgagctctaagaagcaga 301
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 ctgtggaggaagagttgaggcccagttatagctaggcagttctgagctctaagaagcaga 422
Query: 302 tctttccaagtccattctgtcttcctgaggaggatgttggagcatttttttcaggacagg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctttccaagtccattctgtcttcctgaggaggatgttggagcatttttttcaggacagg 362
Query: 362 gccattgtgggaaattctaaccaagtgaacgaccttggtttcttcctagtgaggttacaa 421
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 gccattgtgggaaattctaaccaagtgaacgatcttggtttcttcctagtgaggttacaa 302
Query: 422 ggtctggcttggaaagttacttggaagatgttttagacagaagatttggtgtagttacag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtctggcttggaaagttacttggaagatgttttagacagaagatttggtgtagttacag 242
Query: 482 gtgttaaaattgtggtctaaggggcctttgtcagtggaa 520
|||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgttaaaattgtggtctaaggggcctttgtcagtggaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space: 464610
Effective search space used: 464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_b05.g1 MSMg01no410_b05.g1 CHROMAT_FILE:
MSMg01no410_b05.g1 PHD_FILE: MSMg01no410_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:42 2005
(461 letters)
>mm_chr3_79172600_79173460
Length = 861
Score = 878 bits (454), Expect = 0.0
Identities = 459/461 (99%)
Strand = Plus / Plus
Query: 1 ttggactttctgttagtagacagtcattgttcgattagctggactacagcttgtaagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggactttctgttagtagacagtcattgttcgattagctggactacagcttgtaagcca 260
Query: 61 cttaaaaaaccctttcacacgtgtatgcgcgtgcacatgcacacacacacacatattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttaaaaaaccctttcacacgtgtatgcgcgtgcacatgcacacacacacacatattcag 320
Query: 121 atatattctttggtttatttttgcccatctggtttagagctgctagccctcttgactgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatattctttggtttatttttgcccatctggtttagagctgctagccctcttgactgaa 380
Query: 181 gacaatgtatgtcagcccatctattatcttcactatagccccaagcaaagaaccaaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaatgtatgtcagcccatctattatcttcactatagccccaagcaaagaaccaaagtc 440
Query: 241 accccaagctatatctagaaattccaggatagctgcaatgtattcaagggagcatcatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accccaagctatatctagaaattccaggatagctgcaatgtattcaagggagcatcatga 500
Query: 301 gctattaagcttagagacaaaaaaccccaattgtattttaatttttttattgtactttaa 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gctattaagcttagagacaaaaaacccaaattgtattttaatttttttattgtactttaa 560
Query: 361 ttttttctgtcatgggtttgtccagtttgtgtattaataaatataacacctaanaatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 ttttttctgtcatgggtttgtccagtttgtgtattaataaatataacacctaaaaatgtc 620
Query: 421 agattctgaatgtttagctaagagacaaagcatgtcacagg 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agattctgaatgtttagctaagagacaaagcatgtcacagg 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
