GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATGAG
CCTTGCAAGATGTATTAGACGTAGACATCCCTTTTAGTGCTATGTTCCCA
GATCTCTGACTCTGTGAATAATAATGTCTGGCTGTGAGTCTCTATATTTG
TCCACATCTGCTGCTGGAGGAAGCTTCTATTATGACGACTGAGTAAGGCA
CACATTTATGAAGATAGCAGAACATCACTAGGAGTCATTGTATTGCTATG
TTCACTTTGCAGGAAGAGAAGTATTTGCTTTTCTCTAAGGCCCCTGGCTT
ATCACTAGATAGTATTCCAGGAGAGATTCTCTGAACATTTGATTAGATGG
AATTTGAGGAGAGGTAAAATGAGGTAAAACTTTTAATATTGTTCCTCAGG
CTTATGACACTTTTACATGTGTTTCCCACAACAGTAGCCTAGCACTCCAG
AATATATGTCTTTTGTGTGCTTTACATATACTGAAAATACAGAATTTCTT
AGAATAACAGATGAAAGAGTCTCTGCTAGAACACTTAATTAGAAAAATGA
GAAGAGAAGAAAAATATTAAAACAAAACAAAACAAATTATTCCTCAGATG
GAAAAAAAGAGCTTTCACCATANGCTGTAACATGTGTTCCAAAAGCTATG
GTGTGGTGGACCTGTTCCCTTGTGAAAAATCAACCCTTCCGAAAATGACA
GCCAAATCATGGTTTTCCAAAACTCCCCTCTAATTTTTTTGAACACCCG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAATAAAGCCATCCAAGACCTAAAAAGGGAAGTAG
ACAGAATAAAGAAAACCCAAAGTGAGGCAACACTGGAGATAGAAACCCTA
GGAAAGGAATCTGAAACCATAGATGCAAGCATCAGTAACAGAATACAAGA
GATGGAAGAGAGAATCTCAGCTGCAGAAGATTCCATAGAGAACATCGGCA
CAACAATCAAAGAAAATACAAAATGCAAAAAGATCCTAATTCAAAACATC
CAGGAAATTCAGGACACAATGAGAAGACCAAACGTATGGATAATAGGAGT
AGATGAGAATGAAAATTTCAACTCAAAGGACCGGCAAATATCTTCAACAA
AATTATAGCAGAAAACTTCCCAAACCTAAAGCAAGAGATGCCCATAAACA
TGCAAGAAGCCTACAGAACTACAAATATACTGGACCAGAAAAGAAATTCC
TCCCGACACATAATAATCCNAACAAATATACTANATAAAGATAGAATATT
AAAAGCNTAAGGGAGAAAGGTCAGTGACATATAAAGGGCGGCCTATCAGA
ATTACCCCCGATTTTTACCCGAGAACATGAAAGCANGAAAAGCTTGGACC
GATGTTTTTCCAACTTTATGAAAACCCAAGGCCGCCCCCAAAAATTAACC
TCCGCCACCTTTTCTTAACCTTAATGGAGGAAAAAAGTATTCCCGGAGGA
AACAAATTCCCCTTTTTT

Query= MSMg01no413_i23.b1 MSMg01no413_i23.b1 CHROMAT_FILE:
MSMg01no413_i23.b1 PHD_FILE: MSMg01no413_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:16 2005
         (508 letters)



>mm_chr3_44512445_44513352
          Length = 908

 Score =  890 bits (460), Expect = 0.0
 Identities = 466/468 (99%)
 Strand = Plus / Minus

                                                                       
Query: 41  ctctgactctgtgaataataatgtctggctgtgagtctctatatttgtccacatctgctg 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ctctgactctgtgaataataatgtctggctgtgagtctctatatttgtccacatctgctg 849

                                                                       
Query: 101 ctggaggaagcttctattatgacgactgagtaaggcacacatttatgaagatagcagaac 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ctggaggaagcttctattatgacgactgagtaaggcacacatttatgaagatagcagaac 789

                                                                       
Query: 161 atcactaggagtcattgtattgctatgttcactttgcaggaagagaagtatttgcttttc 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 atcactaggagtcattgtattgctatgttcactttgcaggaagagaagtatttgcttttc 729

                                                                       
Query: 221 tctaaggcccctggcttatcactagatagtattccaggagagattctctgaacatttgat 280
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 728 tctaaggcccctggcttatcactagataggatcccaggagagattctctgaacatttgat 669

                                                                       
Query: 281 tagatggaatttgaggagaggtaaaatgaggtaaaacttttaatattgttcctcaggctt 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tagatggaatttgaggagaggtaaaatgaggtaaaacttttaatattgttcctcaggctt 609

                                                                       
Query: 341 atgacacttttacatgtgtttcccacaacagtagcctagcactccagaatatatgtcttt 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgacacttttacatgtgtttcccacaacagtagcctagcactccagaatatatgtcttt 549

                                                                       
Query: 401 tgtgtgctttacatatactgaaaatacagaatttcttagaataacagatgaaagagtctc 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tgtgtgctttacatatactgaaaatacagaatttcttagaataacagatgaaagagtctc 489

                                                           
Query: 461 tgctagaacacttaattagaaaaatgagaagagaagaaaaatattaaa 508
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgctagaacacttaattagaaaaatgagaagagaagaaaaatattaaa 441


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)