Query= MSMg01no414_o11.b1 MSMg01no414_o11.b1 CHROMAT_FILE:
MSMg01no414_o11.b1 PHD_FILE: MSMg01no414_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:06 2005
(462 letters)
>mm_chr3_148245338_148246200
Length = 863
Score = 563 bits (291), Expect = e-164
Identities = 327/339 (96%), Gaps = 3/339 (0%)
Strand = Plus / Minus
Query: 5 gaattctttttc-gatttacttgagcattggacaatgaaaggtagtgatatttaagtcat 63
|||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 337 gaattctttttcaaaattaattgagcattggacaatgaaaggcagtgatatttaagtcat 278
Query: 64 gaaccatgtaagttataacatggcttcaatttacagcctattgattctaggctacaggac 123
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 277 gaaccatgtaagttataacatggcttcaatttatagcctattgattctaggctacaggac 218
Query: 124 cctaagggaagagtgttgtggacagccctggtactgtttgtatgttgatgctaattctgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cctaagggaagagtgttgtggacagccctggtactgtttgtatgttgatgctaattctgc 158
Query: 184 ttacctgggaggggttgctgacaaggagtgagtcttactcaggtgacttcataggaacca 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 157 ttacctgggaggggttgctgacaaggagtgagtcatactcaggtgacttcatatgaacca 98
Query: 244 atcccctaatgaataaaggagccaatcactgggtgagtattgcgggacttctgggttcaa 303
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 97 atcccctaatgaataaag-agccaatcactgggtgagtag-gcgggacttctgggttcaa 40
Query: 304 tggaggaagagaggaagcaggagagatgtcctttttgga 342
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 39 tggaggaagagaggaagcaggagaaatgtcctttttgga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 863
Length adjustment: 10
Effective length of query: 452
Effective length of database: 853
Effective search space: 385556
Effective search space used: 385556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_o11.g1 MSMg01no414_o11.g1 CHROMAT_FILE:
MSMg01no414_o11.g1 PHD_FILE: MSMg01no414_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:06 2005
(347 letters)
>mm_chr6_112109789_112110535
Length = 747
Score = 629 bits (325), Expect = 0.0
Identities = 340/345 (98%)
Strand = Plus / Minus
Query: 3 ctagcaagaaagacaaagaactggactttttattttttgttatattggaacagagccaca 62
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 631 ctagcaagaaagacaaagaactggactttttaagtcaagttatattggaacagagccaca 572
Query: 63 gccattcatttgcgtattagctgtttccattggtataccaacgaaactgaatcatttcac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gccattcatttgcgtattagctgtttccattggtataccaacgaaactgaatcatttcac 512
Query: 123 atcatgtggaagcctaagatattttccaattggccctttgcagtaaaagtttgtcagtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atcatgtggaagcctaagatattttccaattggccctttgcagtaaaagtttgtcagtat 452
Query: 183 tttatttagactcatatcatatttgcttgaaatgattgtatttcccagtatccaatgggg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tttatttagactcatatcatatttgcttgaaatgattgtatttcccagtatccaatgggg 392
Query: 243 cttctcacttccaagtgggactcatttcttctttgcagaaatatttatttagtaactact 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cttctcacttccaagtgggactcatttcttctttgcagaaatatttatttagtaactact 332
Query: 303 acatttcagaccttgtatgatacaagtatgcttcacactctgaaa 347
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 acatttcagaccttgtatgatacaagtatgcttcacactctgaaa 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
