Query= MSMg01no415_g05.b1 MSMg01no415_g05.b1 CHROMAT_FILE:
MSMg01no415_g05.b1 PHD_FILE: MSMg01no415_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:45 2005
(104 letters)
>mm_chr3_79538756_79539259
Length = 504
Score = 194 bits (100), Expect = 2e-54
Identities = 103/104 (99%)
Strand = Plus / Minus
Query: 1 taaagtgtaactgcagctccagccttgctctgaagggacagagtggccacagcagtgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 304 taaagtgtaactgcagctccagccttgctctgaagggacagagtggccacagcagagcct 245
Query: 61 taacccagaattgccattcagtgacacaccaaagatgatgtggg 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 taacccagaattgccattcagtgacacaccaaagatgatgtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no415_g05.g1 MSMg01no415_g05.g1 CHROMAT_FILE:
MSMg01no415_g05.g1 PHD_FILE: MSMg01no415_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:45 2005
(375 letters)
>mm_chr3_79330220_79330994
Length = 775
Score = 630 bits (326), Expect = 0.0
Identities = 356/370 (96%), Gaps = 8/370 (2%)
Strand = Plus / Plus
Query: 1 agttctcagcacccacacggtgggtgactcacaaccaacttgagctctggggcatatggt 60
||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 201 agttctcagtacccacacggtgggtgactcacaaccaacttgagttctggggtatatggt 260
Query: 61 gtcttctcaggcaccaggcatgtgcaatgctgcacgcaaatgcaggcaaacacttatata 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gtcttctcaggcaccaggcatgtgcaatgctgcacacaaatgcaggcaaacacttatata 320
Query: 121 cctaagacaagattaatatttaatatatgtttcaatttttaaaaagacagcatgatttca 180
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 321 cctaagacaagattaatatttaatatatgttttaattttaaaaaagacagcatgatttca 380
Query: 181 aaaatagacaagagatgtgattgggcacttcacaaagagaacaggcagcaaggaaagtgc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatagacaagagatgtgattgggcacttcacaaagagaacaggcagcaaggaaagtg- 439
Query: 241 ttttt----gtcttctatcatgagagcaatgcaaatcagccctgcacagtgttgcagagg 296
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ---ttccacgtcttctatcatgagagcaatgcaaatcagccctgcacagtgttgcagagg 496
Query: 297 cgagaggatcactacaagttcatggttagcctggtctacacagtgcgctccaggtcagcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cgagaggatcactacaagttcatggttagcctggtctacacagtgcgctccaggtcagcc 556
Query: 357 tcagcaagtc 366
||||||||||
Sbjct: 557 tcagcaagtc 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
