XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAGGG
CATACACTAGTTTAAGCTGCCCACCAGGTAGCAAATGAACATCAGAACGT
AATTAAAAATACCAGCACTTCCATTGCTGTGGAGCAAAGAGCCAAAGTCA
CATGGTCCATGTTAGGAACACATTGCTTTAAAACCCATAAATGCTTTTGA
GAAGTCATAAGTCAATAGAATCTTGCTCATAATAAAACTTGCATTAAAAT
TCCAAAAAATGCCTTATCCCTACAAGTGAAAACAGAAAAACCCGTGAGAT
GGGACTCTTTCTCTCATTCACAATCTTCATGTCACTTATATAAAAAAGTA
GAACAAGGTTCATCAAGTATTCATTTTTCCTGATATAACTAAGAATGAGA
AAATCCTCATGCCATATGAGTAAAATCCATATGCTGAATTGTAATTTGCA
AAATGATGGGATGCAAAAGGATTTCCTGTTTAGGAAATTGTTTATGTTGT
GAAAGTAGATGTCTCATGAATAGAAGCAGACACTAGGGCACCTGGACAGT
AGTCTTTCCACCATCTGAGAACAGAATAAGGTGACAGTTTGAAAGGCAGA
AGCAGGTTCCACTAGAAACTGACCTGTGGTCACACTCACCCTGGATGTCT
ACTCTCCATAGCTATCAGAAATAAAATTCTGTTCTGTTTCATAAGCCCCT
GAAAAATCTTN

GGTNATGGGAAGGNAGNNNAGAGAGNAGNGAGTGGNAAGTATGGAGAGAG
NNAGCAGNNAGGAGNAGNNGNNNNNNNNNCNNNNNCGCTATGATXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCTGTGACAGCCTGATCATGTTTTGGGGAGGACTGTGGA
AAGACTTTGGAAATTTGAGCTAGAAGAGCCACTGGGATGTTAAGAGCTCT
GTGGGATGTTCTATGGGAGCTTGGAAGATAATGCTAAGAACAGTGTAAAC
AATTGTGAAGAATCTGATTCTGGTTAGCTGGGGCTGAAGACTCAGCTGTT
ATTAACAAGATATCAGAGCTGCTTAAGAGAAACCTTTGCTTTACTGGGAT
GATCGATGCTGGTTAACTAGAGCTAAGAAATCAGTAGTGATTAAGAAGAG
ACCAGCATCATAAAGGCAAAACCTTCTGGAAAGTGTTTCCAGAGAGCACA
GAAAAGCTGTGTTCCAGAGTCAACCATGGTTGTACCTTGCGTTGGCAGCC
AGACTTGCTAATATATAAGAGTCACCCAGGTGGTACTGGTTTTGAAACAA
TAAAGGGTTAGCAGCTGATGCTTGGCACTGTGAGAGGTGAGGAGAGGCCA
TTGGTGAAGGTGCAGCCTTGGTGGCAGTTGAAGTCCCAGGACTGAAGGGG
CCATGTAGAAAAGTTAATGCCTAGCCCCATGATAAGAACATATGAGAGGG
TATTTGTGAAGTGCAGTCCAGTTGCAGCAGAAGATAGTAGTGTTTTGGAG
ATGCCAGNATCATGAGATGACCACCAAAN

Query= MSMg01no416_a03.b1 MSMg01no416_a03.b1 CHROMAT_FILE:
MSMg01no416_a03.b1 PHD_FILE: MSMg01no416_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:32 2005
         (594 letters)



>mm_chr3_155821747_155822740
          Length = 994

 Score = 1141 bits (590), Expect = 0.0
 Identities = 593/594 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagtttaagctgcccaccaggtagcaaatgaacatcagaacgtaattaaaaataccagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtttaagctgcccaccaggtagcaaatgaacatcagaacgtaattaaaaataccagca 260

                                                                       
Query: 61  cttccattgctgtggagcaaagagccaaagtcacatggtccatgttaggaacacattgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttccattgctgtggagcaaagagccaaagtcacatggtccatgttaggaacacattgct 320

                                                                       
Query: 121 ttaaaacccataaatgcttttgagaagtcataagtcaatagaatcttgctcataataaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaaacccataaatgcttttgagaagtcataagtcaatagaatcttgctcataataaaa 380

                                                                       
Query: 181 cttgcattaaaattccaaaaaatgccttatccctacaagtgaaaacagaaaaacccgtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgcattaaaattccaaaaaatgccttatccctacaagtgaaaacagaaaaacccgtga 440

                                                                       
Query: 241 gatgggactctttctctcattcacaatcttcatgtcacttatataaaaaagtagaacaag 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgggactctttcactcattcacaatcttcatgtcacttatataaaaaagtagaacaag 500

                                                                       
Query: 301 gttcatcaagtattcatttttcctgatataactaagaatgagaaaatcctcatgccatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttcatcaagtattcatttttcctgatataactaagaatgagaaaatcctcatgccatat 560

                                                                       
Query: 361 gagtaaaatccatatgctgaattgtaatttgcaaaatgatgggatgcaaaaggatttcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagtaaaatccatatgctgaattgtaatttgcaaaatgatgggatgcaaaaggatttcct 620

                                                                       
Query: 421 gtttaggaaattgtttatgttgtgaaagtagatgtctcatgaatagaagcagacactagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtttaggaaattgtttatgttgtgaaagtagatgtctcatgaatagaagcagacactagg 680

                                                                       
Query: 481 gcacctggacagtagtctttccaccatctgagaacagaataaggtgacagtttgaaaggc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcacctggacagtagtctttccaccatctgagaacagaataaggtgacagtttgaaaggc 740

                                                                 
Query: 541 agaagcaggttccactagaaactgacctgtggtcacactcaccctggatgtcta 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaagcaggttccactagaaactgacctgtggtcacactcaccctggatgtcta 794


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)