Query= MSMg01no419_d08.b1 MSMg01no419_d08.b1 CHROMAT_FILE:
MSMg01no419_d08.b1 PHD_FILE: MSMg01no419_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:38 2005
(249 letters)
>mm_chr3_34073807_34074458
Length = 652
Score = 255 bits (132), Expect = 1e-72
Identities = 158/168 (94%), Gaps = 5/168 (2%)
Strand = Plus / Minus
Query: 86 gcaggacacaaaatgctcagattggtgtaggaagaatcctcaaaccaagga---gatgac 142
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 423 gcaggacacaaaatgctcagattggtgtaggaagaatcctcaaaccaaggagatgatgag 364
Query: 143 aagaaagagcccagccccacccccacctgtggtcactgtcccg-aatgtgtctgcacata 201
||||| |||||||||| |||||| ||||||||||||||||||| || || ||||||||||
Sbjct: 363 aagaaggagcccagccacacccctacctgtggtcactgtcccgcaa-gtatctgcacata 305
Query: 202 acacagaaaagcatttgctacacacacacacacacacacacacacaca 249
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acacagaaaagcatttgctacacacacacacacacacacacacacaca 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 652
Length adjustment: 9
Effective length of query: 240
Effective length of database: 643
Effective search space: 154320
Effective search space used: 154320
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_d08.g1 MSMg01no419_d08.g1 CHROMAT_FILE:
MSMg01no419_d08.g1 PHD_FILE: MSMg01no419_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:39 2005
(251 letters)
>mm_chr3_33919484_33920134
Length = 651
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%), Gaps = 2/251 (0%)
Strand = Plus / Plus
Query: 1 attccgaaggaagg-ttcaaaggtgacccgaggccaggcggcaggtgggagggacgcgtg 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccgaaggaagggttcaaaggtgacccgaggccaggcggcaggtgggagggacgcgtg 260
Query: 60 tcttcccagcccctgggaaggtgggtttttttgttttttgtttttgctttttaagtcctc 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tcttcccagcccctgggaaggtgggtttttt-gttttttgtttttgctttttaagtcctc 319
Query: 120 ttccacgaggttctttttgtttcctttgagaagaggccatgcattgccgtggaggctggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttccacgaggttctttttgtttcctttgagaagaggccatgcattgccgtggaggctggc 379
Query: 180 ctcggatacagagggaggattctagagtggaggaatttgtaaggcgcttgcttctattgg 239
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcggagacagagggaggattctagagtggaggaatttgtaaggcgcttgcttctattgg 439
Query: 240 aaaagggggag 250
|||||||||||
Sbjct: 440 aaaagggggag 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
