CTTTTTTTAATTTGTGGGGCGGAAAAGGAATATACTACAAAGAGTGGGGG
GNANNGTTTTTTTCCACAACCACGCGATCAGCCGAGACGGCAGAGGCCCC
GTTCGAGAGGATGACGTGCTCACCCTATTGTAGTCAGAAAGAGAAGCTCG
AAGGCTGCGTTAATCTTGCAGGTGGTGGGGTTCTGGATATCCACTACTTA
GCCCATGGAATGATCTGCAACTGTTAAATAAAGCATTTATATTAAAAAAA
AAGAAGTGGCTCTCTCTTCTGTTTCTTCTAGGCATTCATGTTTCAAAATC
CAGTCCTTGTGGTGTTTGTTTAGAATCCCAGTTCTCCGGAGGCTAAGGCA
GGATGATTGCCAGGGTTCAAGGCCACCTGAACTATATACAGCAAGACTTT
CTCGATTTACAGAGAGAGAGAGAGAGAGAGACAGGGAGAGAGAGAGAGAG
AGAGAGATAGAGTGAGACATAGATTTTTTTTCCTTCCCCTCTCCCTTTTT
TTCCCCCTCCCCTTCTTTTCTCCCCTTTTTCTCCCATTCCTTCTTTTTTC
TTATTTTTTTTCCTTTCCCCATCCTTTCTTTTCCCCCCCTTTTTAACCCC
TCCCTTTTCTTTTTTTTTTTTTCCCTTTTTTCCCCCCCCTCCCTTCTCTC
TCTTTTTTTCCCCTTCCTTCCCCTCTCCCCTTTTCCTGTTTTTTTTCCCT
CCCCCTCCCTTTTTTTCCCCTCCTCCCCCTCTCCCCTTTTTTTTTCCTCC
TT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTGTCTTCCACTCCCCACCCCTACCCCATACCC
AGGAAAGCTTGGAACTGATCGACACTTCCCCTATTACTGGCTCCCTGACC
TAGATTGGATGCACCATGCCATCTGGCGCACTGAAACCTCCTTGGGAAGG
ACTGTGTGGCCTCTGCCTCTGCGACGCGGGCTAGAGACACTCTAACCATG
AAAATAAAATGCCAAACCAAACAGGTTCAATTTAGAAATTGTGGCACGAA
TATCATCACAATTTTTAGAAAAAAACATGAGTTTCTGTGTCCTGTGGCAT
AAGCTTAATCTCAATATTATCAAAATGTGCACAAACATTTTTAAGACTAT
GGCTAAATGCATATATATTCATTTGCTAGGCATAGGGGAGAAAGCTTAAT
TCCATTAATAATGCATAGTTTCATCAAAGAACTTGAAATTAATATTTAAG
GAAAACTTTCACTCCAGCAAGCACTTCTTTGCTAAACCAAAACCCCGAGC
CCACACATTCCTCCCTTCTTTTGTTAAAGTTCGGTTCGCATTTCTGGATA
ATACCATAAGTGAACCCTAAATTGAAGCCCCTTCCTTACCCTGGGGAAAA
ATCTTTTCTTTATCCCCATTTGGAACAACGCCACAAATTTTGGGGGGATA
ACTCTTTTTTGAAAGGTTAACCCCCCCTTCTGTGGGATTTTAATCCTACC
TCTCCCCTTTTTTTTCTTAAG

Query= MSMg01no419_h12.g1 MSMg01no419_h12.g1 CHROMAT_FILE:
MSMg01no419_h12.g1 PHD_FILE: MSMg01no419_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:01 2005
         (406 letters)



>mm_chr3_126335189_126335991
          Length = 803

 Score =  688 bits (356), Expect = 0.0
 Identities = 393/406 (96%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtcttccactccccacccctaccccatacccaggaaagcttggaactgatcgacacttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgtcttccactccccacccctaccccatacccaggaaagcttggaactgatcgacacttc 544

                                                                       
Query: 61  ccctattactggctccctgacctagattggatgcaccatgccatctggcgcactgaaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ccctattactggctccctgacctagattggatgcaccatgccatctggcgcactgaaacc 484

                                                                       
Query: 121 tccttgggaaggactgtgtggcctctgcctctgcgacgcgggctagagacactctaacca 180
           |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||
Sbjct: 483 tccttgggaaggactgtgtggcctctgcctctgcgaggcacgctagagacactctaacca 424

                                                                       
Query: 181 tgaaaataaaatgccaaaccaaacaggttcaatttagaaattgtggcacgaatatcatca 240
           ||||||||||||||  |||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 423 tgaaaataaaatgctgaaccaatcaggttcaatttagaaattgtggcacgaataccatca 364

                                                                       
Query: 241 caatttttagaaaaaaacatgagtttctgtgtcctgtggcataagcttaatctcaatatt 300
            ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaatttttagaaaaa--catgagtttctgtgtcctgtggcataagcttaatctcaatatt 306

                                                                       
Query: 301 atcaaaatgtgcacaaacatttttaagactatggctaaatgcatatatattcatttgcta 360
           ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 305 atcaaaatgtgcacaaacatttt-aagactatggctaaatgcacatatattcatttgcta 247

                                                         
Query: 361 ggcataggggagaaagcttaattccattaataatgcatagtttcat 406
           ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 246 ggcataggggagaaagcttaattccattaataatgcataatttcat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 803
Length adjustment: 9
Effective length of query: 397
Effective length of database: 794
Effective search space:   315218
Effective search space used:   315218
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)