Query= MSMg01no422_b05.b1 MSMg01no422_b05.b1 CHROMAT_FILE:
MSMg01no422_b05.b1 PHD_FILE: MSMg01no422_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:27 2005
(568 letters)
>mm_chr3_152257955_152258922
Length = 968
Score = 953 bits (493), Expect = 0.0
Identities = 525/536 (97%)
Strand = Plus / Minus
Query: 33 aaaaaaagaaaattaaattaaatttaaaaagaactctgagtctagaatccagaaataacc 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aaaaaaagaaaattaaattaaatttaaaaagaactctgagtctagaatccagaaataacc 739
Query: 93 actttaacatttttcatgctgcgtttctcttatattttgataatatgattgttcatactg 152
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 738 gctttaacatttttcatgctgcgtttctcttatattttgataatataattgttcatattg 679
Query: 153 ttctttgttttcagtatttttatcctcaaattttatcatgattatgcctacaaagtgtca 212
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 678 ttctttgttttcagtatttttatcctcaaattttatcatgattatgcctacaaagtctca 619
Query: 213 gtggggtaacttattttccccttagcagcctcttcagtaaagactccagatttcgacttc 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gtggggtaacttattttccccttagcagcctcttcagtaaagactccagatttcgacttc 559
Query: 273 acaacgtctgtgtaagacacattatgaaagctgattctgttgtccgcctcttaaagagca 332
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 acaacgtctgtgtaagccacattatgaaagctgattctgttgtccgcctcttaaagagca 499
Query: 333 cacaaatgaagattctgttggctctgatcctcatatcatggggagttgaaaagcccatat 392
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cacaaatgaagatcctgttggctctgatcctcatatcatggggagttgaaaagcccatat 439
Query: 393 ttattaacaattatatcaccctgccctttggcagtcactctggagatccagagaatgcct 452
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 438 ttattaacaattatatcaccctgccctctggcagtcactctggagatccagagaatgccc 379
Query: 453 gagacaagttctgagcccagcaagtttccagccagagctgatgctaaggcacaagggaag 512
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 gagacaagttctgagcccagcaagtttccagccagagctgatgctaagacacaagggaag 319
Query: 513 ctcanaggtgcgccactttgacggcaggtagaattttgcttaattacttggagagt 568
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 318 ctcaaaggtgcgccactttgactgcaggtagaattttgcttaattacttggagagt 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_b05.g1 MSMg01no422_b05.g1 CHROMAT_FILE:
MSMg01no422_b05.g1 PHD_FILE: MSMg01no422_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:27 2005
(293 letters)
>mm_chr3_152080189_152080877
Length = 689
Score = 534 bits (276), Expect = e-156
Identities = 284/288 (98%), Gaps = 4/288 (1%)
Strand = Plus / Plus
Query: 1 tttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatgaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatgaatttt 260
Query: 61 attagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggcttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggcttgttt 320
Query: 121 ctattttgtgcctttaggaaacaaatagctgtttttaagcacctagcgaagaaatatagt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 321 ctattttgtgcctttaggaaacaaatagctgtttttaagcacctag--aaga--tatagt 376
Query: 181 tactaaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tactaaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattttc 436
Query: 241 tctgcttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtg 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctgcttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 689
Length adjustment: 9
Effective length of query: 284
Effective length of database: 680
Effective search space: 193120
Effective search space used: 193120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
