Query= MSMg01no424_e24.b1 MSMg01no424_e24.b1 CHROMAT_FILE:
MSMg01no424_e24.b1 PHD_FILE: MSMg01no424_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:14 2005
(531 letters)
>mm_chr3_95411317_95412247
Length = 931
Score = 758 bits (392), Expect = 0.0
Identities = 427/442 (96%), Gaps = 7/442 (1%)
Strand = Plus / Minus
Query: 1 taagctgtgatatttttgttattattttatatcacactacatgaactcaaaacaagggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taagctgtgatatttttgttattattttatatcacactacatgaactcaaaacaagggac 383
Query: 61 agagtgagatgggggtgtgctgtgttgttgttcaagcagtgcttgcggctgaatataggg 120
||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 382 agagtgagatgggggtgtgttgtgttgttgttcaagcagggcttggggctgaatataggg 323
Query: 121 ccttgaacacactaggaagtgctgctctactactgagccccatccctcacccaatagagt 180
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 322 ccttgaacatactaggaagtgctgctctactactgagtcccatccctcacccaatagagt 263
Query: 181 atttcattagttactgcaatctaatttttatttttgttgttgttgttgtttattctatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atttcattagttactgcaatctaatttttatttttgttgttgttgttgtttattctatat 203
Query: 241 tattgtcattgcatgcctagggaggtcataggacaatttgggagttagttcttgccttcc 300
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tagtgccattgcatgcctagggaggtcataggacaatttgggagttagttcttgccttcc 143
Query: 301 acctgtgggctttgtggactgaactcaggtcattaggcttggcag------cctttccct 354
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 142 acctgtgggctttggggactgaactcaggtcattaggcttggcagccagtacctttccct 83
Query: 355 gctgaaccatttcacttgctctaattgccttaatctaaacacc-aaatactagtttctat 413
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 82 gctgaaccatttcacttgctctaattgccttaatctaaacaccaaaatactagtttctat 23
Query: 414 ttttgatttttgagttatctag 435
||||||||||||||||||||||
Sbjct: 22 ttttgatttttgagttatctag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_e24.g1 MSMg01no424_e24.g1 CHROMAT_FILE:
MSMg01no424_e24.g1 PHD_FILE: MSMg01no424_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:14 2005
(241 letters)
>mm_chr3_95246015_95246655
Length = 641
Score = 466 bits (241), Expect = e-136
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 aagagatccacctatctctgcctctgggcttaaagtcgtgcaccactgctgcatggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagagatccacctatctctgcctctgggcttaaagtcgtgcaccactgctgcatggctat 260
Query: 61 tacatttgtttatttatttttatatttagtcagttataattgtatgggcttttcctagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatttgtttatttatttttatatttagtcagttataattgtatgggcttttcctagtg 320
Query: 121 ttgttggtcttgaagtaaaagcttaatgattgattttgttttgttttttaagatgtatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttggtcttgaagtaaaagcttaatgattgattttgttttgttttttaagatgtatgt 380
Query: 181 gtgtgtgtgtgtctgtgtgtgtctgtgttattatatatatgtgcccttggaggccagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtgtgtgtgtctgtgtgtgtctgtgttattatatatatgtgcccttggaggccagaag 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
