XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCA
TATTTTCAGCACATAACTGCTTCTAACCATGAAGTATATATGCTTTAATT
TGATGATATGATGATATATTTAAAAAATATACATAGTTATATTTTTAAAT
GATTATTTTGTGATAGAGACAAATCCGATAATTTATTTTTAGGAATATAA
TCTAAGTTTTCCAATTCAGTTGCAAGCCAACAATTCAAATGCAAGCCATC
TTGTAAACAATAATTTTATACTTTGCACAAGTATTTTCTTTCTGTATATA
TATTAAACATATGGTAGCTATTTAATATCAGGAAACTTTTCACGTATTAG
AACAATATTTCCATATTTAATGCATGTTTTCATATTCATTAACCATCATC
CTCTTTCTGTAATTTTGGCAAATACACTTTATATTCATCTCTAATACATT
GCAACAAATTAAAAAGGGGTGGGAGTCTCCTGACTTAATCAAGAAATAAT
CTCATCAGAGATGTACATTTTATATAATTAGATCGTGATTTGCTTTCTAG
AAACCTGACCATCAAACCCAGCTGAAAACTGACAAGGAGATGGGGTGATC
CATATCAAAGTTGTTTCTGAGCAGTTATACTGGAGTAGGTTTTCAAGGCA
GCTGCTGGATCAAAGCACTTATTCTTCCCTGGNATGTACACAAAGCAACA
TCAAATAACTTAGCTGTGCTGGTTTGGCTCTCTTGTATGCT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTAACAGTTGGGTTGAGCAGGTTAAAAGATAATG
AGAATCAGTGTGGAGTTACAGAGACAAAATTTGGAGCTGTGACGAAAGGA
TGGACCATCTAGTGATTGCCATATGCAGGGATCCATCCCATAATCAGCTT
CCAAATGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACC
CAGATATAGCTGTCTCTTGTGAGACTATGTCGGGGCCTAGCAAACACAGA
AGTGGAAAATCACAGTCAGCTATTGGATGGGTCACACGGCCCCCAATGGA
GGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGG
TGGAAAAACAATATGAACTAACCAGTACTCGAGAGCTCTTGTCTTTAGCT
GCATATGTATCAAAAGATGGCCTAACGTGCAGTGGTTCTTAGGCTTGAGC
CAGAACCAGGCAGAATGTCCAGCAGAGTGTCCTATTGTCCTTCCAGCAGA
GTGTCCTATTGCCCCTGCCTCTCANGCAGGAGAGTCCTCAGTTACGTAAC
TATGTTGTCATCTTTTCATGGAGCAAAAAGTCTGTGTTTCGACACTCCTG
ATGTGCTATGAAACTGCTTGCTATCTCTTACGGTACTTTAGACTCCCGAA
AACTTTTTTTCTGTTTTTACCAAAAAACCTCCTGTTTTTGTTGTTTGTGA
AAACAACCAA

Query= MSMg01no425_p11.b1 MSMg01no425_p11.b1 CHROMAT_FILE:
MSMg01no425_p11.b1 PHD_FILE: MSMg01no425_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:19 2005
         (568 letters)



>mm_chr3_47011083_47012050
          Length = 968

 Score = 1031 bits (533), Expect = 0.0
 Identities = 557/567 (98%), Gaps = 5/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcccatatt---ttcagcacataactgcttctaaccatgaagtatatatgctttaa 61
           |||||||||||||   |  || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 887 gaattcccatattaaat--aggacataactgcttctaactatgaagtatatatgctttaa 830

                                                                       
Query: 62  tttgatgatatgatgatatatttaaaaaatatacatagttatatttttaaatgattattt 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tttgatgatatgatgatatatttaaaaaatatacatagttatatttttaaatgattattt 770

                                                                       
Query: 122 tgtgatagagacaaatccgataatttatttttaggaatataatctaagttttccaattca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tgtgatagagacaaatccgataatttatttttaggaatataatctaagttttccaattca 710

                                                                       
Query: 182 gttgcaagccaacaattcaaatgcaagccatcttgtaaacaataattttatactttgcac 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gttgcaagccaacaattcaaatgcaagccatcttgtaaacaataattttatactttgcac 650

                                                                       
Query: 242 aagtattttctttctgtatatatattaaacatatggtagctatttaatatcaggaaactt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aagtattttctttctgtatatatattaaacatatggtagctatttaatatcaggaaactt 590

                                                                       
Query: 302 ttcacgtattagaacaatatttccatatttaatgcatgttttcatattcattaaccatca 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttcacgtattagaacaatatttccatatttaatgcatgttttcatattcattaaccatca 530

                                                                       
Query: 362 tcctctttctgtaattttggcaaatacactttatattcatctctaatacattgcaacaaa 421
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 529 tcctctttctgtaattttggcaaatacactttatattcatctctaatgcattgcaacaaa 470

                                                                       
Query: 422 ttaaaaaggggtgggagtctcctgacttaatcaagaaataatctcatcagagatgtacat 481
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttaaaaaggggtggaagtctcctgacttaatcaagaaataatctcatcagagatgtacat 410

                                                                       
Query: 482 tttatataattagatcgtgatttgctttctagaaacctgaccatcaaacccagctgaaaa 541
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tttatataatttgatcgtgatttgctttctagaaacctgaccatcaaacccagctgaaaa 350

                                      
Query: 542 ctgacaaggagatggggtgatccatat 568
           |||||||||||||||||||||||||||
Sbjct: 349 ctgacaaggagatggggtgatccatat 323


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)