Query= MSMg01no426_a08.b1 MSMg01no426_a08.b1 CHROMAT_FILE:
MSMg01no426_a08.b1 PHD_FILE: MSMg01no426_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:24 2005
(506 letters)
>mm_chr3_81185413_81186319
Length = 907
Score = 859 bits (444), Expect = 0.0
Identities = 474/484 (97%), Gaps = 1/484 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttctggatatcccattgaaatgggtcaaaatcccaatccaagagaattcttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaattcatttctggatatcccattgaaatgggtcaaaatcccaatccaagagaattcttg 425
Query: 65 atatatgaaaagtataacattttcctaggatgcgcttactcactcttcctgtaatacttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atatatgaaaagtataacattttcctaggatgcgcttactcactcttcctgtaatacttg 365
Query: 125 ttacatgttccctgaaaaataactttataaattactgttttgattaatgagatctacact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttacatgttccctgaaaaataactttataaattactgttttgattaatgagatctacact 305
Query: 185 tcgattcattaaaaagaaagaggttccccctcccagagtttaacc-ttccgagagtctta 243
||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 304 tcgattcattaaaaagaaagaggctcccgctcccagagtttaacctttccgagagtctta 245
Query: 244 aagtgtgttcaagggagtcagacataacttttagaatttcttttgtttggatagtggtat 303
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 244 aagtgtgttcaagggagtcagacataacttttagaatttcttttgtttagatagtggttt 185
Query: 304 agtcccagggagctctggaaatactgactagttcatattgctgttcctcctatggggctg 363
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 184 agttccagggagctctggaaatactgactagttcatattgttgttcctcctatggggctg 125
Query: 364 caaaccccttcaaacccctggccctagctacatatgtagcagaggatgacctagtcagtc 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 124 caaaccccttcaaacccctggctctagctacatatgtagcagaggatgacctagtcagtc 65
Query: 424 atcaatgggaggagagacccttggtcctgtgaagattctatgcctcagtataggggaatg 483
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 64 atcaatgggaggagagacccttggtcctgtgaagattctatgccccagtataggggaata 5
Query: 484 ccag 487
||||
Sbjct: 4 ccag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 907
Length adjustment: 10
Effective length of query: 496
Effective length of database: 897
Effective search space: 444912
Effective search space used: 444912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_a08.g1 MSMg01no426_a08.g1 CHROMAT_FILE:
MSMg01no426_a08.g1 PHD_FILE: MSMg01no426_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:24 2005
(328 letters)
>mm_chr3_80996883_80997610
Length = 728
Score = 605 bits (313), Expect = e-177
Identities = 322/325 (99%)
Strand = Plus / Plus
Query: 1 atcatcagtatcctagagtgggccataatagttacatggaacattctattgaataaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatcagtatcctagagtgggccataatagttacatggaacattctattgaataaatta 260
Query: 61 ccttcctgcttactcccctttaaaagccacatcttactatatcaacggatagtagagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttcctgcttactcccctttaaaagccacatcttactatatcaacggatagtagagttt 320
Query: 121 tctcagaagtgtgggtgtcctgcagtaatgcttcacagaagtgttttgtgttttttgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcagaagtgtgggtgtcctgcagtaatgcttcacagaagtgttttgtgttttttgttg 380
Query: 181 ccattggtgatttttgttacctgtctaaatatcgactgtgtgatgcaatccctttttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccattggtgatttttgttacctgtctaaatatcgactgtgtgatgcaatccctttttaat 440
Query: 241 ggagtgtctgacatgagagaacacaatgcaggaacaaaacattggttatgctatttcagg 300
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 441 ggagtgtctgacatgagagaacacaatgcagggacaaaacattggttattctatttcagg 500
Query: 301 actgctcagatctgagaaagaacac 325
|||| ||||||||||||||||||||
Sbjct: 501 actgttcagatctgagaaagaacac 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
