Query= MSMg01no428_a08.b1 MSMg01no428_a08.b1 CHROMAT_FILE:
MSMg01no428_a08.b1 PHD_FILE: MSMg01no428_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:04 2005
(507 letters)
>mm_chr3_123137730_123138636
Length = 907
Score = 919 bits (475), Expect = 0.0
Identities = 499/507 (98%)
Strand = Plus / Plus
Query: 1 tagttctttgtagacagtaaggaaacaagagactatcttgaaaattgcaagttgcttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagttctttgtagacagtaaggaaacaagagactatcttgaaaattgcaagttgcttagt 260
Query: 61 ggccaccccaggattagcatgggacagagtaaaagtcactgcagagaagaccaagaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccaccccaggattagcatgggacagagtaaaagtcactgcagagaagaccaagaggtc 320
Query: 121 atcggtgaaggtgaaagctcaattgcggcacaggtcccaggaagttggagatgttgggat 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 atcggtgaaggtgaaagctcaattgcagcacaggtcccaggaagttggagatgttgggat 380
Query: 181 ggtcagatggctgccaagggtgtcatcaccgactttcctcagtggtggacctgaaagtgt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcagatgactgccaagggtgtcatcaccgactttcctcagtggtggacctgaaagtgt 440
Query: 241 aagatattttatgagctttccttccaagttactttgggttgtggtggttaacccagaaac 300
|||||| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagataaagtaagcgctttccttccaagttactttgggttgtggtggttaacccagaaac 500
Query: 301 tgaaccagaacacacaggaaggtctgagataccagggaagatagacaaaaggccttgtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaaccagaacacacaggaaggtctgagataccagggaagatagacaaaaggccttgtag 560
Query: 361 atgggataatgtaagcaaactagacagagactacagagctcctggccagagacggcaggg 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgggataatgtaaacaaactagacagagactacagagctcctggccagagacggcaggg 620
Query: 421 cagctgtttgcctaccccggagcccctgagtgcaaggctttcatgtaccctctcctcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagctgtttgcctaccccggagcccctgagtgcaaggctttcatgtaccctctcctcaat 680
Query: 481 atagctaattataatagaccaggttgg 507
|||||||||||||||||||||||||||
Sbjct: 681 atagctaattataatagaccaggttgg 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_a08.g1 MSMg01no428_a08.g1 CHROMAT_FILE:
MSMg01no428_a08.g1 PHD_FILE: MSMg01no428_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:04 2005
(505 letters)
>mm_chr3_123319559_123320462
Length = 904
Score = 932 bits (482), Expect = 0.0
Identities = 499/510 (97%), Gaps = 11/510 (2%)
Strand = Plus / Minus
Query: 1 ctcttcagcttacacttctccagactacaggaagtttcatactttataatgagaatgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ctcttcagcttacacttctccagactacaggaagtttcatactttataatgagaatgtag 645
Query: 61 aaaatacagctctcatttctgtcccctctttcttccagctagtgttccagcacaaacgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaaatacagctctcatttctgtcccctctttcttccagctagtgttccagcacaaacgct 585
Query: 121 agtgttcctgccagcatgcattgacaaactggttttataaaggaaagataaatttagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 agtgttcctgccagcatgcattgacaaactggttttataaaggaaagataaatttagtgc 525
Query: 181 ctgtgctgtttgagtggtccctctctgcccacagtcatgtggacatgaggcaaactaa-- 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctgtgctgtttgagtggtccctctctgcccacagtcatgtggacatgaggcaaactaaaa 465
Query: 239 ---ttttttttatgaatctgtctataaattctccctgctgtactgagccggatgtggggt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gcc-----tttatgaatctgtctataaattctccctgctgtactgagccggatgtggggt 410
Query: 296 gggacaagttctgcttccagatccgtgcacattgctcctgaattcggtcttttcattctt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gggacaagttctgcttccagatccgtgcacattgctcctgaattcggtcttttcattctt 350
Query: 356 ctgacttcctagactgcatatcatgtattttctaagatgtggctaggtttggccaagatg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctgacttcctagactgcatatcatgtattttctaagatgtggctaggtttggccaagatg 290
Query: 416 ggagggacagcgggaggacaaatgtcatgtgacacttcctatggaaatatctattcatcc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggagggacagcgggaggacaaatgtcatgtgacacttcctatggaaatatctattcatcc 230
Query: 476 cacataggatagtgattatcaagaccaaag 505
||||||||||||||| ||||||||||||||
Sbjct: 229 cacataggatagtga-tatcaagaccaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 904
Length adjustment: 10
Effective length of query: 495
Effective length of database: 894
Effective search space: 442530
Effective search space used: 442530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
