Query= MSMg01no429_c10.b1 MSMg01no429_c10.b1 CHROMAT_FILE:
MSMg01no429_c10.b1 PHD_FILE: MSMg01no429_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:32 2005
(684 letters)
>mm_chr3_84807538_84808622
Length = 1085
Score = 1294 bits (669), Expect = 0.0
Identities = 678/681 (99%), Gaps = 1/681 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgtttttcctattgaatcagctggtcattgttgacaactcaccagacacatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgtttttcctattgaatcagctggtcattgttgacaactcaccagacacatac 264
Query: 65 ggacttatttctacctccttgtgcggggatattttttt-catattacaaaatattgcaga 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 ggacttatttctacctccttgtgcggggatattttttttcatattacaaaatattgcaga 324
Query: 124 tatttttagaaagtatgacaaggaacaaaggagatgatagtaaaacatgtttaatctcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttttagaaagtatgacaaggaacaaaggagatgatagtaaaacatgtttaatctcat 384
Query: 184 catctagatgagcaaattacattttgaagctatcaatatgaaataatattttccttggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catctagatgagcaaattacattttgaagctatcaatatgaaataatattttccttggaa 444
Query: 244 acagaaagtctggagcaggggagcatggtcgcacagccctaggattctgacaacttgtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagaaagtctggagcaggggagcatggtcgcacagccctaggattctgacaacttgtga 504
Query: 304 ggtgggggtaaaaggattaggagctcagatacataacgaggtcaagttcaacctgggctc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggtgggggtaaaaggattaggagctcagatacataacgaggtcaagttcaacctgggctc 564
Query: 364 aggaaaccgtgtcagtgcaagctacattctcattgatatgaaagcaaaggggtttgcttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggaaaccgtgtcagtgcaagctacattctcattgatatgaaagcaaaggggtttgcttt 624
Query: 424 agcacacagatgaaggacatagtccctaatagggggtgggcactgcagtgtgaatatgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcacacagatgaaggacatagtccctaatagggggtgggcactgcagtgtgaatatgag 684
Query: 484 gtagctgatcacattgcttctgcagtcaggaatcacagtcacatgaatccttgtgtccag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtagctgatcacattgcttctgcagtcaggaatcacagtcacatgaatccttgtgtccag 744
Query: 544 ctcaatttctcttttttgatccagtacaggacctcagaccgtggagtggcatttcgggga 603
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 745 ctcaatttctcttttttgatccagtacaggacctcagaccgtggagtagcatttcgggga 804
Query: 604 agtctcacagacattctcaagtgtttgcttccaaggtggctctagaatctatcaagtgaa 663
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 805 agtctcacagacattctcaagtgtttgcttccaaggtggttctagaatctatcaagtgaa 864
Query: 664 caatcagtattaaccattgca 684
|||||||||||||||||||||
Sbjct: 865 caatcagtattaaccattgca 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1085
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1075
Effective search space: 724550
Effective search space used: 724550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_c10.g1 MSMg01no429_c10.g1 CHROMAT_FILE:
MSMg01no429_c10.g1 PHD_FILE: MSMg01no429_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:32 2005
(244 letters)
>mm_chr3_84972892_84973532
Length = 641
Score = 424 bits (219), Expect = e-123
Identities = 236/243 (97%), Gaps = 3/243 (1%)
Strand = Plus / Minus
Query: 1 aggacagccagggctacacagagaacccctgtctcaaacagtcatacaaacaaacaaaca 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 478 aggacagccagggctacacagagaacccctgtctcaaacagtcaaacaaacaaacaaaca 419
Query: 61 aacagaagcaaaatggttttgttgattcatacaaggaacccaaattctagtaactgatga 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aacagaagcaaaatggtttcgttgattcatacaaggaacccaaattctagtaactgatga 359
Query: 121 gcatagcatggcatgtcgtggcgttctttctccctatattcctgttggcagagcctggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcatagcatggcatgtcgtggcgttctttctccctatattcctgttggcagagcctgggg 299
Query: 181 tttaaggtggttttctacccgagtgtaggaacacatcatggactggaacgtgaaacacct 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 298 tttaaggtggttttctacccgagtgtaggaaca---catggactggaacgtgaaacacct 242
Query: 241 gga 243
|||
Sbjct: 241 gga 239
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 641
Length adjustment: 9
Effective length of query: 235
Effective length of database: 632
Effective search space: 148520
Effective search space used: 148520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
