XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
GAGGTATTAACATAATAAAATCTTGATATATTATATACAAAAGACAAATC
CCTGATCATTTGTTTTTATGCAGATGAGTTTGATTTAGACATAATTCCCT
AACATCACCATGACTTTCCATCTGTGTAACCTTGATGTTCTTAAGCAGGC
TGCAGTTACCTCAGGCTCTGGCTATATTCATTCTGTATGTATGGAGACTG
TGACTATCTTAACACTTGAATGATGATAGGAATAACAATTGTTTGTTGAT
CTTCTTCTCTGTCTCCCTGGATAACTTGCTGTCTGCAAAGGCTCAATAAG
TGGCAGAGAGCTTTTGTCACCCCTTATCCAAGCTGTACACTTGTAAGGAA
GAGCAGGGATAATCGCCTCAATCTAATTAGGGGTTAAAAGAGGCCATGAC
TGTGATATGGCAGTGAGACACCTTACTGTAGCAATCCTGTTTGCATTAGA
AAAATAAGGTTGTCATATTGATTATTCAAATTGGCGTGCATTGGCCAGAC
CTCAATGACTTGTATTGCAGCTGAAGCACTTGAAGATCCCAGCTATTCAC
AGAAGACCTGTGCCATAGCATATATTATATTGTGGCTTGTGTGCTAATTT
GAAATTGTAAGGATGAAGGCTGAGTTTAATCANGATATTTAAAAGTTAAA
CCAGTCTTTAGAAACTAAAATTGAGTTTCT

ATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTATTTAGCTCTATACCCCATTTTTA
AATAGGGTTATTTGGTCTCTGGAGTCCAACTTCTTGAGTTCTTTGTATAT
GTTGGATATCAGCCCTCTAATATATAGATTTGGTAAAGATATTTTCTCAA
TCTGTTGGTTGCCATTTTCTCGTATTGACAGCGTCCTTTCCCTTACAGAA
GCTTTGCGATTTTATGAGGTCCCATTTGTCAATTCTTGATCTTAGAGCAC
AAGCTATTGGTGCTCTGTTCTGGAAATTTTCCCTGTGCCCATGTGTTTGA
GGCTCTTCCCCACTTTCTCTTCTATTAGTTTCAGTGTTTCTGGTTCTATG
TGGAGGTCTTTGATCCGCTTGGACTTAAGCTTTTTTTCCTCTCACTTTTA
CAGTAAGTGCCCTTATCCAGNCAGGCATCTCCCTGGACCCTTAATTATAT
TATTTTTTAACACCAAGCGTGGATTATGATTATTTAGGGGGAACTTTTTT
TATTTTATATCCCCTCCAGAAAGGAATTTATAAAATTGTGTTTTTGGGCT
CCCCCCCCTTCTTTTTTTTTTTCAAATTAATGTTAATTTTCCCTAATTTC
CCCTTTGTCGAGGATCTTTTTGCGGTTTTTTAATCCCCATTAACATCCTT
CCCCCCCTCGTTTGGCCCCTTTCTCCCCCCTCTTTTGTTCTTCCACCCCC
CTCAAG

Query= MSMg01no429_i14.b1 MSMg01no429_i14.b1 CHROMAT_FILE:
MSMg01no429_i14.b1 PHD_FILE: MSMg01no429_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:03 2005
         (615 letters)



>mm_chr3_66939513_66940527
          Length = 1015

 Score = 1189 bits (615), Expect = 0.0
 Identities = 615/615 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataataaaatcttgatatattatatacaaaagacaaatccctgatcatttgtttttatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataataaaatcttgatatattatatacaaaagacaaatccctgatcatttgtttttatg 260

                                                                       
Query: 61  cagatgagtttgatttagacataattccctaacatcaccatgactttccatctgtgtaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatgagtttgatttagacataattccctaacatcaccatgactttccatctgtgtaac 320

                                                                       
Query: 121 cttgatgttcttaagcaggctgcagttacctcaggctctggctatattcattctgtatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgatgttcttaagcaggctgcagttacctcaggctctggctatattcattctgtatgt 380

                                                                       
Query: 181 atggagactgtgactatcttaacacttgaatgatgataggaataacaattgtttgttgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggagactgtgactatcttaacacttgaatgatgataggaataacaattgtttgttgat 440

                                                                       
Query: 241 cttcttctctgtctccctggataacttgctgtctgcaaaggctcaataagtggcagagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcttctctgtctccctggataacttgctgtctgcaaaggctcaataagtggcagagag 500

                                                                       
Query: 301 cttttgtcaccccttatccaagctgtacacttgtaaggaagagcagggataatcgcctca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttttgtcaccccttatccaagctgtacacttgtaaggaagagcagggataatcgcctca 560

                                                                       
Query: 361 atctaattaggggttaaaagaggccatgactgtgatatggcagtgagacaccttactgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctaattaggggttaaaagaggccatgactgtgatatggcagtgagacaccttactgta 620

                                                                       
Query: 421 gcaatcctgtttgcattagaaaaataaggttgtcatattgattattcaaattggcgtgca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaatcctgtttgcattagaaaaataaggttgtcatattgattattcaaattggcgtgca 680

                                                                       
Query: 481 ttggccagacctcaatgacttgtattgcagctgaagcacttgaagatcccagctattcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttggccagacctcaatgacttgtattgcagctgaagcacttgaagatcccagctattcac 740

                                                                       
Query: 541 agaagacctgtgccatagcatatattatattgtggcttgtgtgctaatttgaaattgtaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaagacctgtgccatagcatatattatattgtggcttgtgtgctaatttgaaattgtaa 800

                          
Query: 601 ggatgaaggctgagt 615
           |||||||||||||||
Sbjct: 801 ggatgaaggctgagt 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)