Query= MSMg01no432_b15.b1 MSMg01no432_b15.b1 CHROMAT_FILE:
MSMg01no432_b15.b1 PHD_FILE: MSMg01no432_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:41 2005
(462 letters)
>mm_chr3_74100219_74101083
Length = 865
Score = 824 bits (426), Expect = 0.0
Identities = 449/458 (98%), Gaps = 3/458 (0%)
Strand = Plus / Minus
Query: 5 gaattcattctttgctaatgactctggcttgtgtcaagttgaaaaacataacataaacca 64
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 742 gaattcattctttgcaaatgactctggcttgtgtcaagttgaaaaacaaaacataaacca 683
Query: 65 aaataatactagccagcacaagttgtaaagtt---aaaaaaaattcatcccagttttgta 121
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 682 aaataatactagccagcacaagttgtaaagttaaaaaaaaaaattcatcccagttttgta 623
Query: 122 gaatctctttgcctatggacatctccatattaatagcgtcaacaagtatggatttctgct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaatctctttgcctatggacatctccatattaatagcgtcaacaagtatggatttctgct 563
Query: 182 ttattcatgtaagtctaccctcttccatgtcccatacttccaagattggaagaaaactgt 241
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 562 ttattcatgtaagtctaccctcttccatgtcccatacttccaagatacgaagaaaactgt 503
Query: 242 ctaatagagctttgtatttcaagatgcacaagtaaatgaaaatctcattgaaaatgtcca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctaatagagctttgtatttcaagatgcacaagtaaatgaaaatctcattgaaaatgtcca 443
Query: 302 cggtgatttgttcatatatatccaacattaaattgtttctccttgtttttctccctttct 361
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 cggtgatttgttcatatatatccaacattaaattgtttctccatgtttttctccctttct 383
Query: 362 attgcctcattcttacatgtattttgtcaagattttaatattagatatttcaaaaactca 421
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attgccccattcttacatgtattttgtcaagattttaatattagatatttcaaaaactca 323
Query: 422 agtttggtttgtaatgtgtgtgtatgtgtgtatgtatg 459
||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agtttggtttgtaatgtgtgtgtatgtgtgtatgtatg 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 865
Length adjustment: 10
Effective length of query: 452
Effective length of database: 855
Effective search space: 386460
Effective search space used: 386460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_b15.g1 MSMg01no432_b15.g1 CHROMAT_FILE:
MSMg01no432_b15.g1 PHD_FILE: MSMg01no432_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:41 2005
(435 letters)
>mm_chr3_73926137_73926971
Length = 835
Score = 810 bits (419), Expect = 0.0
Identities = 431/435 (99%)
Strand = Plus / Plus
Query: 1 attagcaataaacttctagaagatcatcattttccattctttttcatattttaatacaag 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 attagcaataaacttctagaagatcatcattttctattctttttcatattttaatacaag 260
Query: 61 attttatgtggttctctgaggaggtagttaatactcatctcagttttttacacagttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttatgtggttctctgaggaggtagttaatactcatctcagttttttacacagttagt 320
Query: 121 gttgtcaaattgcataacattaaataaatattcatttacgaaaactaaggctcctgaata 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gttgtcaaattgcataacattaaataaatattcatttacaaaaactaaggctcctgaata 380
Query: 181 ccttcttacaaattagtgtcatataatcaaaagaagaaatttgctgaaaatattcaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttcttacaaattagtgtcatataatcaaaagaagaaatttgctgaaaatattcaaatg 440
Query: 241 acatattcacttcataggaatatcacaaatggaagactcataacactaccctgagtttta 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 acatattcacttcataggaatatcacaaatggaagactcataacactatcctgagtttta 500
Query: 301 aggctgcaatacaagaggttggagaaatatttctgctcttaaatatcgtgtttgttcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggctgcaatacaagaggttggagaaatatttctgctcttaaatatcgtgtttgttcttc 560
Query: 361 ctgataatcaggggtcaactcctaactcatagctatctgtaactctagttctagggaatt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgataatcaggggtcaattcctaactcatagctatctgtaactctagttctagggaatt 620
Query: 421 tggttcccttgtctg 435
|||||||||||||||
Sbjct: 621 tggttcccttgtctg 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
