XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCC
AAATATTCTCGGACCAGAAAAGAAATTCTTCCCAACATAATAATCCAAAC
AACAAATGTACTAAATAAAGATCGAATATTAAAAGAAGTAAAGGAAAAAG
GTCAAGTAACATACAAAGGCAGACCTCTTAGAATTATACCAGAATTCTCA
CCAGAGACTATGAAAGCCAGCAGACCCTGGACAGATGTTATACAGAAAAT
AAAAGTGCACAATTGCCAGCACAGACTACAATACTTAGCAAAATTTTCAA
TTACAATAGATGGAGCAACCAAAGTATTCCATGACAAAACCAAATTTACA
CAATATCTTTCCATGAATCCAGCCCTTAAAGGATAATAAAGGGAAAACTT
CAACACAAGGAAGGAAACTACACCCAAGAAAGTAATGCTTCAACACACCT
AAAAGAAGACAGCCACAAGAACAGAATCGCAACTCTAACAACAAAAATAA
CAGGAAGCAATAATTATGTCTCCTTAATATCTCTTCATATCAATGGACTC
CATTCCCCAATAAATAGACTACCTGACTGGGAACATAAACCGGACCCAAC
CCTTTTTGTGCTTACAGGAAACCCCCCCTCCGGGACAAATAAGGATACTT
ATTCCAAGGTAAAGGGTGGAAAAAAATTTTTTCATGGAAAGGGTCCCAAA
AAAAAAGGTGGGACAAGCTTCCCTAATATAAAAAAATACTATTTCTTTCT
CTAGGTCTTATAAAAGAAAAAGAGGGGGTCTTCTTTTCTTCTCAGGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATGCCTTGCATGGCCTATGGATGGAAACAT
CAAGGAAGAGAGGGAAGAAAGATATTAGGAGCCATAGGACCAGATTGTCT
TCTGTATAGGACAGGGAAAATGTACCCATGATATCTCAACAACATGCTTT
TCTTAACCAGTCAGGAATGGTGACAACACCAGTTGACACATCATCATGAA
TGAAGACTATGACACTTGAAGTCATCTGTTTGGACACACACACACACACA
CACACACACACACACACACTCACACACACACACACAGACACATACACACA
CACACACTCACATAAACACCAATACATATCATGTATATCTACACAAATAT
GAATAAACAAATAACAGATTTCCAGAAATGTCTTTATGTGTAACTAAACT
TTGGTCTTCTAAGTAAATTTCACCATGATACCTCTAGAGATTTGCTGTCA
TAAATAAGTAGAACTTACCATCCAGCAAAAAGCAAATAGTTTTCTCTTAA
ACGTTCAGGTTTGAAAATATAAAATTAATTAATTAAAAAAAGAGCCAAAT
AGTTCTCAGGTCATTTTGACTGAAGAGCTTTAAGGGTAAAAGAGTGGAAA
CCGGTTGCGTTTTTCCCCCCCCGGAGTACACGATCGGGATCTCTTAAGGG
CTTTACTTTTTTTGATCCAAACCACCCAACTTTTTTTCTATCCGTCTACT
TCCATTTTTCCTTTTTTTCCTTTTAAACN

Query= MSMg01no432_n14.g1 MSMg01no432_n14.g1 CHROMAT_FILE:
MSMg01no432_n14.g1 PHD_FILE: MSMg01no432_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:44 2005
         (434 letters)



>mm_chr3_3408669_3409502
          Length = 834

 Score =  781 bits (404), Expect = 0.0
 Identities = 419/430 (97%), Gaps = 10/430 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   cttgcatggcctatggatggaaacatcaaggaagagagggaagaaagatattaggagcca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cttgcatggcctatggatggaaacatcaaggaagagagggaagaaagatattaggagcca 264

                                                                       
Query: 65  taggaccagattgtcttctgtataggacagggaaaatgtacccatgatatctcaacaaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggaccagattgtcttctgtataggacagggaaaatgtacccatgatatctcaacaaca 324

                                                                       
Query: 125 tgcttttcttaaccagtcaggaatggtgacaacaccagttgacacatcatcatgaatgaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcttttcttaaccagtcaggaatggtgacaacaccagttgacacatcatcatgaatgaa 384

                                                                       
Query: 185 gactatgacacttgaagtcatctgtttggacacacacacacacacacacacacacacaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gactatgacacttgaagtcatctgtttggacacacacacacacacacacacacacacaca 444

                                                                       
Query: 245 cacactcacacacacacacacagacacatacacacacacacactcacataaacaccaata 304
           |||||          |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacac----------acacacagacacatacacacacacacactcacataaacaccaata 494

                                                                       
Query: 305 catatcatgtatatctacacaaatatgaataaacaaataacagatttccagaaatgtctt 364
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 495 catatcatgtatatctacacaaatatgaataaacaaataaaagatttccagaaatgtctt 554

                                                                       
Query: 365 tatgtgtaactaaactttggtcttctaagtaaatttcaccatgatacctctagagatttg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tatgtgtaactaaactttggtcttctaagtaaatttcaccatgatacctctagagatttg 614

                     
Query: 425 ctgtcataaa 434
           ||||||||||
Sbjct: 615 ctgtcataaa 624


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space:   350625
Effective search space used:   350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)