Query= MSMg01no432_o21.b1 MSMg01no432_o21.b1 CHROMAT_FILE:
MSMg01no432_o21.b1 PHD_FILE: MSMg01no432_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:51 2005
(420 letters)
>mm_chr3_7173341_7174159
Length = 819
Score = 762 bits (394), Expect = 0.0
Identities = 409/414 (98%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 7 gaattcagagaagctaccctgtcatggtagaattcaaacatgaccagaagggtttcctca 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaattcagagaagctatcctgtcatggtagaattcaaacatgaccagaagggtttcctca 622
Query: 67 catcttccccctgtgacagattggataccattcttcccccaatactcagaaaaaaaaaaa 126
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 621 catcttccccctgtgacagattggataccattcttcctccaatactcag-aaaaaaaaaa 563
Query: 127 tcatgaaaatttgaagttttgggtgtcctgtgttattccaggctatgtcagttgcaaggt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcatgaaaatttgaagttttgggtgtcctgtgttattccaggctatgtcagttgcaaggt 503
Query: 187 tctacccactacttttgtagttttaggctcggtggctttgcagtttagctagcagacagg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tctacccactacttttgtagttttaggctcggtggctttgcagtttagctagcagacagg 443
Query: 247 taagagtttcaggcaattagtttgctcagaggatttacttttggctggggcagggggtgt 306
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 442 taagagtttcaggcaattagtttgctcaaaggatttacttttggctggggcagggggtgt 383
Query: 307 ccttccttttgagatggcctttatccttggcctgggggagaggcccaatctgacatctgc 366
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 382 ccttccttttgagatggcctttatccttggtctgggggagaggcccaatctgacatctgc 323
Query: 367 tccaggtccataccagcaaagcaagtccctctttcctgcttgtgcatgcaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tccaggtccataccagcaaagcaagtccctctttcctgcttgtgcatgcaccct 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_o21.g1 MSMg01no432_o21.g1 CHROMAT_FILE:
MSMg01no432_o21.g1 PHD_FILE: MSMg01no432_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:51 2005
(401 letters)
>mm_chr3_7017303_7018103
Length = 801
Score = 775 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 1 agccactggggtccttactcaaccaaacttagccaacttaagtgctttcaatcatatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccactggggtccttactcaaccaaacttagccaacttaagtgctttcaatcatatcct 260
Query: 61 tggtatatgcaaaacagacaagaaggacaaacaacagtctggatattcaagatccagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtatatgcaaaacagacaagaaggacaaacaacagtctggatattcaagatccagagg 320
Query: 121 gttataaatattctcaatatgatattttcatatcacacatatatgagggaacattaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttataaatattctcaatatgatattttcatatcacacatatatgagggaacattaaatt 380
Query: 181 atatatgtataaagttactattaaattactacatttccatctaataaataatagtctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatatgtataaagttactattaaattactacatttccatctaataaataatagtctgaa 440
Query: 241 gaatcaagatgaatataagggtattttatttatcaaagcacataacttcataatatatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatcaagatgaatataagggtattttatttatcaaagcacataacttcataatatatat 500
Query: 301 aaggatgaatataaaggcatttcacaaattctttgaaataatacctagaaaaaaaaacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggatgaatataaaggcatttcacaaattctttgaaataatacctagaaaaaaaaacat 560
Query: 361 taaaatgtagccctcctaatttttggctatataacttgaat 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaatgtagccctcctaatttttggctatataacttgaat 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
