Query= MSMg01no433_d06.b1 MSMg01no433_d06.b1 CHROMAT_FILE:
MSMg01no433_d06.b1 PHD_FILE: MSMg01no433_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:13 2005
(370 letters)
>mm_chr3_145104021_145104790
Length = 770
Score = 592 bits (306), Expect = e-173
Identities = 339/350 (96%), Gaps = 2/350 (0%)
Strand = Plus / Plus
Query: 22 acttgattattatttgtttttaaggggagcatttcaaattaacaatgggatattgtcctt 81
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 acttgattattatttgcttttaaggggagcatttcaaattaacaatgggatattgtcctt 281
Query: 82 ctacctgtagggacccagaggaccagatggcctcgcaggggatcaaggaggacatggtgc 141
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 282 ctacctatagggacccagaggaccagatggccttgcaggggatcaaggaggacatggtgc 341
Query: 142 taaggtacttgctgattctccatttcactcgcagttaaatgtggcagagccattatgtcc 201
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 342 taaggtacttgctgattctccatttcacgcgcagttaaatgtggcagagccattatgtcc 401
Query: 202 tgtatattgaaatactaccgcatagtgtttaatacatatcagccatgtatcctttttaat 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgtatattgaaatactaccgcatagtgtttaatacatatcagccatgtatcctttttaat 461
Query: 262 attgaactgtgtttttgatgccctgctttctgtgtagtaccgttaaaaccatggctcaca 321
|||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |
Sbjct: 462 attgaactgtgtacttgatgccctgttttctgtgtagtaccattaaaaccatggctca-a 520
Query: 322 -ttctgaccagtccatgtgatattgatatttttatagggtgaaaaaggaa 370
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 521 gttctgaccagtccatgtgatattgatattttcatagggtgaaaaaggaa 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_d06.g1 MSMg01no433_d06.g1 CHROMAT_FILE:
MSMg01no433_d06.g1 PHD_FILE: MSMg01no433_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:14 2005
(296 letters)
>mm_chr3_145256169_145256864
Length = 696
Score = 534 bits (276), Expect = e-156
Identities = 291/296 (98%)
Strand = Plus / Minus
Query: 1 ttggttatctctcatgtcccgtggagtcactcagtttcagacctcctgatttggatcacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttggttatctctcatgtcccgtggagtcactcagtttcagacctcctgatttggatcacg 437
Query: 61 tccctctccttaaatcacactccctgctcaaataatcactgccacagtcaaggttaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tccctctccttaaatcacactccctgctcaaataatcactgccacagtcaaggttaactt 377
Query: 121 ttcccttcaagtctgacccactttgtagatattcctgaaatggttaaaatttctggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttcccttcaagtctgacccactttgtagatattcctgaaatggttaaaatttctggagtt 317
Query: 181 ttctatactctcagacagaaccttgtcagcatggtagctgatttgatccacatgctactg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 316 ttctatactctcagacagaaccttgtcagcatggtagctgatttgatccacatgctgctg 257
Query: 241 gtttcatctgcaggacccttagtcacagccaatgaggactgcactgtgactcgcac 296
| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 256 ggctcagctgcaggacccttagtcacggccaatgaggactgcactgtgactcgcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
