XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCAACTGATCCATACCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAGC
ATCCTTAATCATCAGGGAAATGCAAATCAAAGCAACCCTGAGATTCCATC
TCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCAGATGC
TGGTGAGGATGTGGAGAAGGAGGAACACTCCTCCATTGTTGGTGTGATTG
CAAGCCTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAAT
TGGACATAGTACTACCAGAGGATCCAGCAATACCTCTCCTGGGCATATAT
CCAGAAGATGTTCCAACTAGTAAGAAGGACACATGCTCCACTATGTTCAT
AGCAACCTTATTTATAGTAGCCAGAAGCTGGAAAGAACCCAGATGCCCCT
CAACAGAAGAATGGATACAGAANATGTGGTACATTTACACAATGGAGTAC
TACTCAGCTATTNAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGGT
GGACCTGGAGGGCATCAAACTGAGTGAGGTAACCCAATCACAAAGAACTC
CCAGGTATGTACTCCCTGATAAGGGGGAATTACTCAAAAACTTNAATAAC
CCGAAAACATCTTGCAACACCTGAAATTCCGAAGAAGAAAACCAAATGGG
GACCTTTGTCCCCTTCCAAAATAGGAAACAAAC

TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTGTAGAATTCCGATTTTCAATTTTTTAAATAT
AAAACACAGGCCGCCCCGCCCCTTCCTGGCCACAGATGTGTGTGGTTAGC
GGTTAACTTAGCTCCCTCAGTTAGACCCGGCTAGGAGTCGCTGTGTGAGC
CACTTCCTTAGCCACAAACTGGATATGACAGTGACATTTGTCTTTTAGGA
TGGCTGCAAGCGTTAAAAAGTGGCAAGGGAAAGATTTAAGATAGTGACTA
AAATATTGAGCTCTAAGTAAATGAGAATCGCTAATTGCACTGTTATCAAT
AACGTATACACTATTGTAGTTTGGGTTCCTTACTCTGGTGTGACGTGTTT
ATGGAAAAAAAAAGGTTTATTTAAAAGAAAAGCTGAAATGACTATTTGTT
TAAAAGAATCCATGTGTTTGTGAGACAAGATCTCAGGTACCCCAGCATAG
ACTTGAATTGTGGAGCCTAGGGTGACAAGGAACTCTGTCTGCCTCTACCC
CCTCTTCTGGGTGCTCGGATTACAGGTGTACTTTCCCCTTACCCGGTTTC
TGAGGGTGCCGCCGGATGATTTTCTGCTTCCCTGACTGTTTGTTGATATC
CCTTCCCCAGGCTTAGTAAAAAATGGTTTTTTAAACCACCATTTCCCCTT
GGGTTTTTTTTCCCACAGTGCCGGTTTATTATTTGTCAAAACTA

Query= MSMg01no433_d21.g1 MSMg01no433_d21.g1 CHROMAT_FILE:
MSMg01no433_d21.g1 PHD_FILE: MSMg01no433_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:17 2005
         (495 letters)



>mm_chr3_27051601_27052497
          Length = 897

 Score =  930 bits (481), Expect = 0.0
 Identities = 493/497 (99%), Gaps = 2/497 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgtagaattccgattttcaattttt-taaatataaaacacaggccgccccgccccttcc 59
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 697 ctgtagaattccgattttcaatttttaaaaatataaaacacaggccgccccgccccttcc 638

                                                                       
Query: 60  tggccacagatgtgtgtggttagcggttaacttagctccctcagttagacccggctagga 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tggccacagatgtgtgtggttagcggttaacttagctccctcagttagacccggctagga 578

                                                                       
Query: 120 gtcgctgtgtgagccacttccttagccacaaactggatatgacagtgacatttgtctttt 179
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtcgctgtgtgagcaacttccttagccacaaactggatatgacagtgacatttgtctttt 518

                                                                       
Query: 180 aggatggctgcaagcgttaaaaagtggcaagggaaagatttaagatagtgactaaaatat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aggatggctgcaagcgttaaaaagtggcaagggaaagatttaagatagtgactaaaatat 458

                                                                       
Query: 240 tgagctctaagtaaatgagaatcgctaattgcactgttatcaataacgtatacactattg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgagctctaagtaaatgagaatcgctaattgcactgttatcaataacgtatacactattg 398

                                                                       
Query: 300 tagtttgggttccttactctggtgtgacgtgtttatggaaaaaaaaa-ggtttatttaaa 358
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 397 tagtttgggttccttactctggtgtgacgtgtttatggaaaaaaaaaaggtttatttaaa 338

                                                                       
Query: 359 agaaaagctgaaatgactatttgtttaaaagaatccatgtgtttgtgagacaagatctca 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agaaaagctgaaatgactatttgtttaaaagaatccatgtgtttgtgagacaagatctca 278

                                                                       
Query: 419 ggtaccccagcatagacttgaattgtggagcctagggtgacaaggaactctgtctgcctc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggtaccccagcatagacttgaattgtggagcctagggtgacaaggaactctgtctgcctc 218

                            
Query: 479 taccccctcttctgggt 495
           |||||||||||||||||
Sbjct: 217 taccccctcttctgggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 897
Length adjustment: 10
Effective length of query: 485
Effective length of database: 887
Effective search space:   430195
Effective search space used:   430195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)