Query= MSMg01no433_l14.b1 MSMg01no433_l14.b1 CHROMAT_FILE:
MSMg01no433_l14.b1 PHD_FILE: MSMg01no433_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:54 2005
(258 letters)
>mm_chr3_141054376_141055033
Length = 658
Score = 468 bits (242), Expect = e-136
Identities = 254/258 (98%)
Strand = Plus / Plus
Query: 1 tctattctagatttgtccacttggtcatgatttgccaacttatgttttagacgctaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tctattctagatttgtccacttggtcatgatttgccaacttatgttttagacgttaacat 260
Query: 61 cttttgtaataagaaaagtaggtcaactgtaagattccgggaatccatgagaggaaaaga 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 cttttgtaataagaaaagtaggtcaactgtaagattccaggaatccatgagaggaaaaga 320
Query: 121 tgggatatttagcaggagaatcaaaagttaacaactaagttaagaatggtctagctaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggatatttagcaggagaatcaaaagttaacaactaagttaagaatggtctagctaagt 380
Query: 181 agcaatcagcatcaggcaggaaaggtggaaatggaaagcaccaaccagttacataaacca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaatcagcttcaggcaggaaaggtggaaatggaaagcaccaaccagttacataaacca 440
Query: 241 tcatttgctgttttatat 258
|||||||||| |||||||
Sbjct: 441 tcatttgctggtttatat 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_l14.g1 MSMg01no433_l14.g1 CHROMAT_FILE:
MSMg01no433_l14.g1 PHD_FILE: MSMg01no433_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:54 2005
(418 letters)
>mm_chr3_141222308_141223130
Length = 823
Score = 779 bits (403), Expect = 0.0
Identities = 416/423 (98%), Gaps = 5/423 (1%)
Strand = Plus / Minus
Query: 1 agtaaaataaacactaatcctttctcacaaattgaatacaaatccttgtcctctcagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agtaaaataaacactaatcctttctcacaaattgaatacaaatccttgtcctctcagatc 564
Query: 61 cctggaaagagaagacaaacttcccaactgactcactacaaggaatcagctctgcaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cctggaaagagaagacaaacttcccaactgactcactacaaggaatcagctctgcaaacc 504
Query: 121 accacaggaaggataccgatgtcattgaaatgcggaggattatggacaaggaggttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 accacaggaaggataccgatgtcattgaaatgcggaggattatggacaaggaggttattt 444
Query: 181 ctcatcaccttcctcagatataccacacagacatgccaacatatgtaaaatgacatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctcatcaccttcctcagatataccacacagacatgccaacatatgtaaaatgacatttca 384
Query: 241 aaagtgaagtgaaagaaa-----aaggatgtcggaacgctgcttttccatccactgctga 295
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaagtgaagtgaaagaaagagaaaaggatgtcggaacgctgcttttccatccactgctga 324
Query: 296 actgctgtccaccagtctctgcggggacttagtctatgagaaacaaactttacaatagga 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actgctgtccaccagtctctgcggggacttagtctatgagaaacaaactttacaatagga 264
Query: 356 aagagaatggattaaactgttttcaaatgactgcatatcctgcatcctgtgcaaaacaga 415
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 263 aagagaatggattaaagtgttttcaaatgactgcatatcctgcatcctgtgcaaaacgga 204
Query: 416 tca 418
|||
Sbjct: 203 tca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 823
Length adjustment: 9
Effective length of query: 409
Effective length of database: 814
Effective search space: 332926
Effective search space used: 332926
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
