XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
CAAATCTTCCACACTTTTATTTGGGTCTCTACACAACCCAAACACTCTTT
CCATGCCTGGCTGACAACTATTCTTGCTGTAGATCTCAGTAAAAATATCA
CTCTGTGCCCTACCCCACCCCATCAGTCATCACCCTTTACAGTAATTCTA
TTTACTGTATGTCTTTCTCTTCATTCTGCACATGCCGTAAATGCAATAGC
CACATCTGCTTATCAGCAACATTCAGAGGGCAGCATTAGTCCTGCTACAG
TAGTTGATACTCAATAAATATTTGTTGGGAGGAGAGAACCAACAAATATC
TATTAACACAGCAGACAAAAGGAGATATGAACGGGTACATAAAACAAATC
CTATCTGAAACAGTCAACATCCAAACTTACTTGAATTTGGCTTCGTGAAT
CTCAGTCTTATATAGCAAGCACAGACCTGCAAGACTCTTCCAAAATTTCT
ACATGGTTTATTGATATCATGGTGAACAGTTACCTTGCTCACTTCCTTCA
AGGCCCTTTTGCAGACTTCATACTTTGGAGAGTCCTTGGGTGTTTTTTGA
CAGATAGTCTAGGATGAAGTAAAAAGAACACAGCCCATTGACTTAATATA
GGTAGCAAAATAAACCACTATTTAGCTATTTCCTCTTACTCCAACAAAAA
ATGGGTTTCTGAACCCAATTTTTGTGTGGGGGAATATAAAAGGGG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCCTGTGAATACACCTGCTATGCAGCCCAGGAA
AACGAGAAACAGACTTTCCAAAAAATCCAGAGAGAGAAAAGAAACTAAGC
AACAAAGCACTCACCTAACAAAGACAAATCTAGAAATCAGTACCTAGAAA
TATATTCACCCCAAATCCAAATACCTAAATATTAGTGTAAAAACACCCTT
GATAACAGCCTGGGCAATATGTCTCCACTAGAACCCAGTAATCCTGAATA
TTTCAGAATAGCTGAAGCATAAGAAAAGGACCTTAAAATCAATTCTATGA
AGATGGGTAGAGGTCCTTAAGGGAGAAATCAATAAATCTCTTAAAGAATT
CTAGAAAAATGGGAGGAAATTTAAAAATAAAAAAACATTTCTTTAAAAAA
AATTTTAAAAATCCAAAAAAAAAAAAAAACCACACACACACACACACACA
CACACACACACACACACACACACAAACAGGTGAGGGAAATGAATAGAATT
GTTCCAGACCTGAAAGTGAAAATGGAATCCTTATAGAAAACCCAACTAAA
GGGATTCGGGAAATGGAAAATTAGGAATTTTAACAGGGGCTATAGGTGGG
GGCCCCCTTCCCCGGAAACAAGAGAGGGGGGGGGGAAACTCCGGGGGGTG
GACCCCCCCCACAAAAAAAATAACTTTTAGGGGAAAAACGGGGGTTTCCC
CCCCCCACAAN

Query= MSMg01no434_n20.b1 MSMg01no434_n20.b1 CHROMAT_FILE:
MSMg01no434_n20.b1 PHD_FILE: MSMg01no434_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:24 2005
         (488 letters)



>mm_chr3_62230389_62231277
          Length = 889

 Score =  922 bits (477), Expect = 0.0
 Identities = 483/485 (99%), Gaps = 1/485 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcaaatcttcc-acacttttatttgggtctctacacaacccaaacactctttc 63
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gaattcttcaaatcctccaacacttttatttgggtctctacacaacccaaacactctttc 630

                                                                       
Query: 64  catgcctggctgacaactattcttgctgtagatctcagtaaaaatatcactctgtgccct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 catgcctggctgacaactattcttgctgtagatctcagtaaaaatatcactctgtgccct 570

                                                                       
Query: 124 accccaccccatcagtcatcaccctttacagtaattctatttactgtatgtctttctctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 accccaccccatcagtcatcaccctttacagtaattctatttactgtatgtctttctctt 510

                                                                       
Query: 184 cattctgcacatgccgtaaatgcaatagccacatctgcttatcagcaacattcagagggc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cattctgcacatgccgtaaatgcaatagccacatctgcttatcagcaacattcagagggc 450

                                                                       
Query: 244 agcattagtcctgctacagtagttgatactcaataaatatttgttgggaggagagaacca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agcattagtcctgctacagtagttgatactcaataaatatttgttgggaggagagaacca 390

                                                                       
Query: 304 acaaatatctattaacacagcagacaaaaggagatatgaacgggtacataaaacaaatcc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 acaaatatctattaacacagcagacaaaaggagatatgaacgggtacataaaacaaatcc 330

                                                                       
Query: 364 tatctgaaacagtcaacatccaaacttacttgaatttggcttcgtgaatctcagtcttat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tatctgaaacagtcaacatccaaacttacttgaatttggcttcgtgaatctcagtcttat 270

                                                                       
Query: 424 atagcaagcacagacctgcaagactcttccaaaatttctacatggtttattgatatcatg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atagcaagcacagacctgcaagactcttccaaaatttctacatggtttattgatatcatg 210

                
Query: 484 gtgaa 488
           |||||
Sbjct: 209 gtgaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 889
Length adjustment: 10
Effective length of query: 478
Effective length of database: 879
Effective search space:   420162
Effective search space used:   420162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)