Query= MSMg01no439_p24.b1 MSMg01no439_p24.b1 CHROMAT_FILE:
MSMg01no439_p24.b1 PHD_FILE: MSMg01no439_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:16 2005
(357 letters)
>mm_chr3_29408121_29408877
Length = 757
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%), Gaps = 1/354 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccctgtgtgttggctgttcatctacagactggaatcttggtggaggtgctgga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaattcaccctgtgtgctggctgttcatctacagactggaatcttggtggaggtgctgga 302
Query: 65 acttctgattggtagttagatttgtctttcccccgaatgtttcccctctacatgacagcc 124
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 301 acttctgattggtagttagatttgtctttcccccaaatgtttcccctctacatgccagcc 242
Query: 125 ctgagctttctttctgcttgttctcaaagtccagagattttatatggtagctttcatcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgagctttctttctgcttgttctcaaagtccagagattttatatggtagctttcatcct 182
Query: 185 cagatagcctattttaagaggttcaaagagaagctgcaatatttcttatgatccactctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagatagcctattttaagaggttcaaagagaagctgcaatatttcttatgatccactctt 122
Query: 245 agaagccaatggcatcacaactgtacctgttgagcaagtgtacagaagggcagctgagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaagccaatggcatcacaactgtacctgttgagcaagtgtacagaagggcagctgagat 62
Query: 305 tagaggaggagaaggaggagaaaaagatgaagagga-gggaatgagacaatgac 357
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 tagaggaggagaaggaggagaaaaagatgaagaggaggggaatgagacaatgac 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_p24.g1 MSMg01no439_p24.g1 CHROMAT_FILE:
MSMg01no439_p24.g1 PHD_FILE: MSMg01no439_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:16 2005
(423 letters)
>mm_chr3_29244398_29245220
Length = 823
Score = 810 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Plus
Query: 1 acttatcctttgtcacacttgacttaactcagctattggtttatgcagtaacagatgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttatcctttgtcacacttgacttaactcagctattggtttatgcagtaacagatgttc 260
Query: 61 atccacacctgtctggcttcaggtcattcttgcgtattgcaatgctctggaactttgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccacacctgtctggcttcaggtcattcttgcgtattgcaatgctctggaactttgcag 320
Query: 121 aggcctgatttaatttttaaagacactgtgctattgttttggtgctgctaattttagaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aggcctgatttaatttttaaagacactgtgctattgttttggtgctgcaaattttagaaa 380
Query: 181 ttgatactataaagatttcttcttctgcgatttatcagatgcattgagccaatctaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgatactataaagatttcttcttctgcgatttatcagatgcattgagccaatctaataa 440
Query: 241 acacatttaggcaggctgagtgagcagtgcttacaagactctccagagcattcgtgttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacatttaggcaggctgagtgagcagtgcttacaagactctccagagcattcgtgttgg 500
Query: 301 ttgggtgcacactcagcagttgtaagtgcagactgcagaagcatttgtgcccacactgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgggtgcacactcagcagttgtaagtgcagactgcagaagcatttgtgcccacactgta 560
Query: 361 tcatgggtacatttatacttagctcctggttctctaacaaccgtgagttatatttagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatgggtacatttatacttagctcctggttctctaacaaccgtgagttatatttagcaa 620
Query: 421 ctg 423
|||
Sbjct: 621 ctg 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
