Query= MSMg01no442_o23.b1 MSMg01no442_o23.b1 CHROMAT_FILE:
MSMg01no442_o23.b1 PHD_FILE: MSMg01no442_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:21 2005
(421 letters)
>mm_chr3_76477823_76478643
Length = 821
Score = 768 bits (397), Expect = 0.0
Identities = 412/417 (98%)
Strand = Plus / Minus
Query: 5 gaattcctaagtatactcgatcagaatatatttggtttggatgagagtatatcattaatg 64
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 430 gaattcctaagtatacttgatcagagtatatttggtttggatgagagtatatcattaatg 371
Query: 65 tgcaaaattgaattaataaagagaagatttatttaaggattaaactttaaatgtttgatt 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgcaaaagtgaattaataaagagaagatttatttaaggattaaactttaaatgtttgatt 311
Query: 125 cttagactaattattatatatgaagtcacattttgaaacagactatgtactctgatataa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cttagactaattattatatatgaagtcacattttgaaacagactatgtactctgatataa 251
Query: 185 tagattacaaatcaaattctatgatttccagcttttcctaattcttttattctctcatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tagattacaaatcaaattctatgatttccagcttttcctaattcttttattctctcatat 191
Query: 245 gttataccccaacttcagtttcacctccatcctcgcttactagcccctaccttctgctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gttataccccaacttcagtttcacctccatcctcgcttactagcccctaccttctgctcc 131
Query: 305 tcctctcccccaatctactcctcctccattttccttcaaaaaggagcaagcttcctacaa 364
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 130 tcctctcccccaatctactcctcctccattttccttcaaaaagaagcaagcttcctaaaa 71
Query: 365 atatcaaccaaattcatcataccaagtttcaataagtcgaggcacttcttttcctga 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atatcaaccaaattcatcataccaagtttcaataagtcgaggcacttcttttcctga 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_o23.g1 MSMg01no442_o23.g1 CHROMAT_FILE:
MSMg01no442_o23.g1 PHD_FILE: MSMg01no442_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:21 2005
(379 letters)
>mm_chr3_76331214_76331992
Length = 779
Score = 710 bits (367), Expect = 0.0
Identities = 378/385 (98%), Gaps = 6/385 (1%)
Strand = Plus / Plus
Query: 1 atgtgacagtgatttcaacttcactctgttgagaacctctttgtaggattacagtggtga 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgtgacagtgacttcaacttcactctgttgagaacctctttgtaggattacagtggtga 254
Query: 61 aagtctatgttattgagggacaacaaccacttagcctatcaagaagaaaaagctatcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aagtctatgttattgagggacaacaaccacttagcctatcaagaagaaaaagctatcagt 314
Query: 121 caggtttgtactttttttttttttt------gccctggaaattccatatccatccctcct 174
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 315 caggtttgtacttttttttttttttttttttgccctggaaattccatatccatccctcct 374
Query: 175 ctgaggtttctacttctatcagcaacttagttttcagaaaactcaggagtcctgagaggt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctgaggtttctacttctatcagcaacttagttttcagaaaactcaggagtcctgagaggt 434
Query: 235 atctcaccacacccaagggcaacacctcccatgacattaacatcatccataagttccacc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atctcaccacacccaagggcaacacctcccatgacattaacatcatccataagttccacc 494
Query: 295 cacctcattgagtctatatgaactttccatatttctcaccgtgcaccagacttggaacac 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cacctcattgagtctatatgaactttccatatttctcaccgtgcaccagacttggaacac 554
Query: 355 atgagccttttgggaataacacaga 379
|||||||||||||||||||||||||
Sbjct: 555 atgagccttttgggaataacacaga 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
