NCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTCAAAATTCCTGCCAGCACACTCGCAGAAAGAACAAAAAGGA
GGGATGAAGACAGACGTGAAGTTTCTTTAAGTGTGGAGAATGGAAAGTAG
GTTGCACCATGCTAGCAGGTAGACAGTTATGACAGGAACCCTGACCTCTT
TTAAAAATTAAATGAGTCACTTTATAAGTGTTGCACAAAAACCCACAACC
GAGCACATTAGTGGTGTCCCACGTGAGGCTGTGATTTGTGTAAATACTGT
GTGTAGTGCTTATGTCAAGCTAAACATACTCAATTCCTCAAATATTTATC
ACTTGTTTACACAGTCGAAAGCACACCTTTTATAGTACTTTTTTCATTTT
AATGAACTTTTGGAAGTTTTAAAATTTGGATTCTAGAGATAAAAGAGTGG
AAGTGAGCCCAGGCAGACATCCAGGGGTTCCTTAGGAACTTGTCAAATCC
AGAGAGCTTTGGATGTAAGAGACCCCCCCCCCATCCCAAGTCCTACTGAG
CACAGGTGGGGCCTTGGGACACCTCCGTTGTGATAAAAAGTTCCAAGGCC
CTCTTTCTTTGTGAAGATATCTGAAAGAAGCCCCATTTTGCCTTTTTATC
TGAAGACAAAAACACGCCGGGGGTTATTTATTTCTTTCCCCGGGAAACAC
ATTTGACTTCTTTTCGGGGCTGGTTTTATTCCTTTATTAAACTTCTTGTT
TTATCTCACCGATCTTTTTTTTTGTTCTCCCCCTACCATCCCCT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGGTTTTGGGTTGTTGTGGGGT
TGTTTAATTGTTGAAGCTTTTTATAGAATCCAGGGGGTAGCTCCTTTCGG
ATAAATAACTGACAAAGACTTTCCCCGTTGTATAGATGGTCTCTTTGCCT
GCTGATGGTTTCCTTTGCTGTCCAGCCCTTTAATGTAATTGCTTTTGCCA
GTTGTTTCCTGTGCTGCTAGGAGGACTTTCCAGAAAGTCCTTGCCTATAG
CTGCATGTAAAATTATTTTTTTTATGTCAGAGGTAGCAGGTCAGAGTTCA
GGTCTTGCATGGGTTCTTTGAGTTAAGGCCCTATACTCCAATCTTTGGTC
CATCTTGAACTGACTTACATGCTAGTATGGAGAGGTGCATCCCCTTTCAT
TCTATGCATGTGCACTCTGCGTTGCCCCTCAATTTTGTTGTCTTCGGAGC
TTCCAGTCTTTCTTTACCCCACCTTGTTGCCTTCGCCCCCCGCCTCAATA
TTCTTATTCTGCTATAACCGTTGTTTCCCCCTCCCTCTTTTCCCCCCGCG
CTCTATCTTCCTTTACTTCTCCATTCTACTTCTCTTGTTCCCTTCTCCCC
TCTTGTTCTTTTCTTTTTCCTGCTTTATTCGCTTGACTCTTTCTACATTT
TCACCTATTTATCCTCCCCCTCCTCCCCATTTCTTTTCCTATCTTTTATC
ACCCCCCCTTCCTCCCCTCTCG

Query= MSMg01no442_p11.b1 MSMg01no442_p11.b1 CHROMAT_FILE:
MSMg01no442_p11.b1 PHD_FILE: MSMg01no442_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:24 2005
         (445 letters)



>mm_chr3_84099675_84100519
          Length = 845

 Score =  837 bits (433), Expect = 0.0
 Identities = 442/445 (99%), Gaps = 1/445 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcacactcgcagaaagaacaaaaaggagggatgaagacagacgtgaagtttctttaagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcacactcgcagaaagaacaaaaaggagggatgaagacagacgtgaagtttctttaagtg 260

                                                                       
Query: 61  tggagaatggaaagtaggttgcaccatgctagcaggtagacagttatgacaggaaccctg 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggagaatggaaggtaggttgcaccatgctagcaggtagacagttatgacaggaaccctg 320

                                                                       
Query: 121 acctcttttaaaaattaaatgagtcactttataagtgttgcacaaaaacccacaaccgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctcttttaaaaattaaatgagtcactttataagtgttgcacaaaaacccacaaccgag 380

                                                                       
Query: 181 cacattagtggtgtcccacgtgaggctgtgatttgtgtaaatactgtgtgtagtgcttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacattagtggtgtcccacgtgaggctgtgatttgtgtaaatactgtgtgtagtgcttat 440

                                                                       
Query: 241 gtcaagctaaacatactcaattcctcaaatatttatcacttgtttacacagtcgaaagca 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gtcaagctaaacatactcaattcctcaaatatttatcacttgtttacacagttgaaagca 500

                                                                       
Query: 301 caccttttatagtacttttttcattttaatgaacttttggaagttttaaaatttggattc 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccttttatagta-ttttttcattttaatgaacttttggaagttttaaaatttggattc 559

                                                                       
Query: 361 tagagataaaagagtggaagtgagcccaggcagacatccaggggttccttaggaacttgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagagataaaagagtggaagtgagcccaggcagacatccaggggttccttaggaacttgt 619

                                    
Query: 421 caaatccagagagctttggatgtaa 445
           |||||||||||||||||||||||||
Sbjct: 620 caaatccagagagctttggatgtaa 644


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space:   363225
Effective search space used:   363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)