XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTAG
ATGTCCATCCTCTTTGTAAAAATTCTGACCACATCATCTTAGGTTGGTGC
CTCCCCCTGTCCATTATATTTACAGACCATGCTAAGTCAAAAGATTGTGA
GCCAGGATTCTCATGGGGTTTCCACATTTATCAACCAGGCACAGATCTGT
TTATGCCAAATTGACAGTTCCTATTTGTCCCAACCCTGTTTAGTTCCCCA
TCCACAGCCACCCAAAAAACCTGATCGTCCATTTTTCACTGAAACTGCTT
ATAATTTTACCTCAGAAATTTCCCTTGCTCCCATAGCTAATCCTCTCCCC
TTTATTCATACCGAGAATCTTATTCTCACCTTAGTAAATCAAACCTTTCT
TGAGCTTAATGCTACCTCCCCTAATCTTGTTGTGTTATCATTCTCAACCA
CCTTTTTATGAAGGTATTGCTGTTACTTGCCGGTTTATCCCTACAAGTAA
TTCCCATCATTGCCGCTGGCAACCTGGAGAGTGGAATGATATCTCTCTCT
CTCTTTCTCTCTCTCTCTCAAGNCTCGGGATTGGGCCACTATGTGACTTA
TAATACCCCTCCTCCAAAGTATGCCCATCTTTGCAATGTCACCCTTGCCC
CTGAAATTAGTATATAGGATTTAGGTCCCCCCTTAAGAAACCTTGGGAGG
GTTTGCCTTGAAAAGCCCTCCCCCCCTGGCCCCCCCACCCATG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGAAATCTGCCTGCCTCTGCCTCCCTAGTGATGG
GACTAAAGGTGTGCACCACCATCGGCCTGCATAAAATACTATTTTTTTAT
TGAGGTATTAAAAGCTGCACTGTAATGCACTCATATATAAGAACTGGCAG
GCTAACTTCGTAACGTGAAAGTGGTGATTTTGGTATTGATTTTAAAGAGA
AAAGATTGTTTAAAATCAGGGTTTGCTTTCCAAAAGTTATGGAAATATTC
TAATATTACAAAAGAAACTTAAAAATAACGATTCAAATTGCCAGTGTTTC
ATTGACTGCAGTTTGCAGTTTGATTGCAAGGTCAGGTTTTAAATTCACCC
ATATATTATAATTAGAATGATTACAAGACTTTATCTTATAAGAACACTAA
TGCAGCTCCCTGAAACCATCGAGCCATACAAAGCAAAGACAGACTGATCT
GGATATATTCATTTGTGTAGAAATTGGACCCTCATACAATCAGTTTGGCT
ATGGTTGCTTCCTCGCAGGGGACTACAGGACAACCAATGCTTTCAGTACT
AAGGGTATAAGGAATGTCTTAAATATAAAACCTCCCTAAAAAAGACTGTC
CCACAAATACACGCTATAAAACTGGACAGCCAAATTGTTTCCTCTGGCAA
TTTGCCCTCCTTCTCCACACCCTCAAACTACTCCCCCTCGTCCTCCCAA

Query= MSMg01no445_f03.b1 MSMg01no445_f03.b1 CHROMAT_FILE:
MSMg01no445_f03.b1 PHD_FILE: MSMg01no445_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:28 2005
         (538 letters)



>mm_chr3_3334610_3335547
          Length = 938

 Score =  998 bits (516), Expect = 0.0
 Identities = 522/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttagatgtccatcctctttgtaaaaattctgaccacatcatcttaggttggtg 64
           |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 524 gaattctttagatgtcaatcctctttgtaaaaattctgaccacatcaccttaggttggtg 465

                                                                       
Query: 65  cctccccctgtccattatatttacagaccatgctaagtcaaaagattgtgagccaggatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cctccccctgtccattatatttacagaccatgctaagtcaaaagattgtgagccaggatt 405

                                                                       
Query: 125 ctcatggggtttccacatttatcaaccaggcacagatctgtttatgccaaattgacagtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctcatggggtttccacatttatcaaccaggcacagatctgtttatgccaaattgacagtt 345

                                                                       
Query: 185 cctatttgtcccaaccctgtttagttccccatccacagccacccaaaaaacctgatcgtc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cctatttgtcccaaccctgtttagttccccatccacagccacccaaaaaacctgatcgtc 285

                                                                       
Query: 245 catttttcactgaaactgcttataattttacctcagaaatttcccttgctcccatagcta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 catttttcactgaaactgcttataattttacctcagaaatttcccttgctcccatagcta 225

                                                                       
Query: 305 atcctctcccctttattcataccgagaatcttattctcaccttagtaaatcaaacctttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atcctctcccctttattcataccgagaatcttattctcaccttagtaaatcaaacctttc 165

                                                                       
Query: 365 ttgagcttaatgctacctcccctaatcttgttgtgttatcattctcaaccacctttttat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ttgagcttaatgctacctcccctaatcttgttgtgttatcattctcaaccacctttttat 105

                                                                       
Query: 425 gaaggtattgctgttacttgccggtttatccctacaagtaattcccatcattgccgctgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gaaggtattgctgttacttgccggtttatccctacaagtaattcccatcattgccgctgg 45

                                                       
Query: 485 caacctggagagtggaatgatatctctctctctctttctctctc 528
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  caacctggagagtggaatgatatctctctctctctttctctctc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)