Query= MSMg01no446_i17.b1 MSMg01no446_i17.b1 CHROMAT_FILE:
MSMg01no446_i17.b1 PHD_FILE: MSMg01no446_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:06 2005
(147 letters)
>mm_chr3_35136350_35136896
Length = 547
Score = 269 bits (139), Expect = 6e-77
Identities = 145/147 (98%)
Strand = Plus / Plus
Query: 1 taaaaccaaggcaaggcagggcgagctagtgggtgagtgagggatttgttccagccatgc 60
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 201 taaaaccaaggcaaggcagggcgagctaatgggagagtgagggatttgttccagccatgc 260
Query: 61 atctgcagcctttcccacttgcatctcttctcgtacaagcccaggttaaaagcatgtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgcagcctttcccacttgcatctcttctcgtacaagcccaggttaaaagcatgtact 320
Query: 121 acaggaatgtaagccaaacactatcgg 147
|||||||||||||||||||||||||||
Sbjct: 321 acaggaatgtaagccaaacactatcgg 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 547
Length adjustment: 8
Effective length of query: 139
Effective length of database: 539
Effective search space: 74921
Effective search space used: 74921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_i17.g1 MSMg01no446_i17.g1 CHROMAT_FILE:
MSMg01no446_i17.g1 PHD_FILE: MSMg01no446_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:06 2005
(243 letters)
>mm_chr3_35292083_35292724
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 237/243 (97%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 tagctcacgtacacctctcaacagctgccttttgtcattgcattatcaccaaaaggcagt 60
||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 442 tagctcatgtacacctctcaacagctgccttttgtcattgcagtatcaacaaaaggcagt 383
Query: 61 ggcatgcccagagttgtttctatcccttttgggggggaagaagaatatgaagggaaaaga 120
|||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 382 ggcatgtccagagttgtttctatccctttt-gggggaaagaagaatatgaagggaaaaga 324
Query: 121 ctcaacaaaagattgtaagatggaaggagccagtggtgaaggggcctcctggatttcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctcaacaaaagattgtaagatggaaggagccagtggtgaaggggcctcctggatttcttc 264
Query: 181 tttttaaatgttaccctgaagttcagaacctattttatgtgaactttcttgggtagagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttttaaatgttaccctgaagttcagaacctattttatgtgaactttcttgggtagagta 204
Query: 241 cgg 243
|||
Sbjct: 203 cgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
