NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACTGCTATACGAACTGTAGAGTTGAGAGCTAAAAATCAAAACA
AACTAAAGTAAACACAAACAACAACAACAAGAAGGACAACAACTGTCAGT
GTCTAGTGCATCGGAGTCCCAGAAATAGAGCCACATTAACGCAGGAAGTA
CACAGTCAAGTCAGCCAATGTCCAGTTTATTCAAAGTTCTAACTTCTTTT
AAATGAAATGCATAAGAAAGATTTCCTACAGATTCTAGTTTTCACCATGT
GCTATTTTCTTAGCAATAGCTTATCTTGATTCAAAGTGACTCAAATCTTG
CAGACTGAGAAATCTGCAAGCAGTCTAAATGTTTGATGTGTTGTTCTATA
TAAGTAAAACAAAGTTACTTTTTCATGAAAAAGGATCATGAAGGCCACTA
TCTGAGAAAATATGCCTTATTATCTCAGTATGCTAACATTGACAGGAATC
CTCTTTGCCTCACATCTAGCAAGCTAGGAGCAGTCTCCTCATGCAACAAA
TTACTCCTTCCTCCCTTAAGTTGCCTTTGCCAGAGCATTTTATCACAGCA
CATAAATTTCTTCCAGAGATCAACTTGGTATTGCTCAGTAAGTATGTGAT
TAATGGAGTAGGAAAGAGCATATATTTTTACTCACAAGAGAATAGTATGG
ACAGTTTCCTAAGAAGGGTGAACACACTGAAACAATAATCTCATAGTTGT
ACTGGGAAG

NCCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTAGTAAACCCATCTGGTCCTGG
GATTTTTTTCATTGGGAGATTATTAATGACTGTTTATATTTTTTAGGGGT
TAAGGGACTGTTTAGATGGTTTATGTGATCCTGATTTTACTTTGGTAGTT
CGTAGTTTCTGTTGTTATATCTCCCTTTTCATTTCTGATTTTGTTAATTT
GGATACCGTCTCTGTGTCCTTTGGATAGTCTGGATAAGAGTTTATAATTC
TTGTTGATCTTCTCAAAGAACCTGCTCCTCGTTTTGTTGACTTTTGTACA
GTGTTTGTTTGTTTGTTTGTTTCTACTTGGTTGATTTCAGCACTGAGTTT
ATTGCCTGACTTCTACTCCTTTTGGGTGTATTTGCTTCTTTTTGATCTAG
AGCTTGCAAATGTGCTGTAAAGCTGCTAGCGTATTGCTCTCTCTAGTTTC
TTTTTGGAGGCACTCAGAGCTATGAGCTTTCCTCTTAACACTTGTTTTCT
TACGTCCCATAAGTTTGAGAATTTTGCGTTTTCCCCCTCCTTAATAACCA
ACAGCCCTTACATTCCTTCTTTTTTTTCCTCCCTTGACCAGGTTATCCTT
CTGCGTGGGTCTCTTGGTTTCTCTCCCTCTGCGTTATAGAAGGGATTCTC
CGCCCTGCCCTTTCCCCCTCCTCGTCTCTCCTCCTCCTTATTTTCTTCCT
CCTCTCTTTGCTGACTTCCCTCTTTCTTACCCCCTACCTTGTCCTTCCTT
A

Query= MSMg01no447_e18.b1 MSMg01no447_e18.b1 CHROMAT_FILE:
MSMg01no447_e18.b1 PHD_FILE: MSMg01no447_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:08 2005
         (582 letters)



>mm_chr3_15820680_15821661
          Length = 982

 Score = 1073 bits (555), Expect = 0.0
 Identities = 573/579 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactgctatacgaactgtagagttgagagctaaaaatcaaaacaaactaaagta 63
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 ggaattcactgctatatgaactgtagagttgagagctaaagatcaaaacaaactaaagta 263

                                                                       
Query: 64  aacacaaacaacaacaacaagaaggacaacaactgtcagtgtctagtgcatcggagtccc 123
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 aacacaaacaacaacaacaagaaggacaacaactgtcaatgtctagtgcatcggagtccc 323

                                                                       
Query: 124 agaaatagagccacattaacgcaggaagtacacagtcaagtcagccaatgtccagtttat 183
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaaatggagccacattaacgcaggaagtacacagtcaagtcagccaatgtccagtttat 383

                                                                       
Query: 184 tcaaagttctaacttcttttaaatgaaatgcataagaaagatttcctacagattctagtt 243
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 tcaaagttctaacttcttttaaatgaaatgcataagaaagatttcccacagattctagtt 443

                                                                       
Query: 244 ttcaccatgtgctattttcttagcaatagcttatcttgattcaaagtgactcaaatcttg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcaccatgtgctattttcttagcaatagcttatcttgattcaaagtgactcaaatcttg 503

                                                                       
Query: 304 cagactgagaaatctgcaagcagtctaaatgtttgatgtgttgttctatataagtaaaac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagactgagaaatctgcaagcagtctaaatgtttgatgtgttgttctatataagtaaaac 563

                                                                       
Query: 364 aaagttactttttcatgaaaaaggatcatgaaggccactatctgagaaaatatgccttat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaagttactttttcatgaaaaaggatcatgaaggccactatctgagaaaatatgccttat 623

                                                                       
Query: 424 tatctcagtatgctaacattgacaggaatcctctttgcctcacatctagcaagctaggag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatctcagtatgctaacattgacaggaatcctctttgcctcacatctagcaagctaggag 683

                                                                       
Query: 484 cagtctcctcatgcaacaaattactccttcctcccttaagttgcctttgccagagcattt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 684 cagtctcctcatgcaacaaattactccttcctcccttaagttgcctttgtcagagcattt 743

                                                  
Query: 544 tatcacagcacataaatttcttccagagatcaacttggt 582
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tatcacagcacataaatttcttccagagatcaacttggt 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)