TGTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGGATCCG
CGGAATTCTGCTGGCATTACCAAAGAAAAAGAAAAGAAAAAAGATGTTCT
AGAAAAACTTCAAGTTCAGCTTAAAAGCAGTTTAAAACAATCTTTTAAAG
GAACACAGTCAATAGAACAAAGCAAATCCTAGCTTGAAAGATTTTATTTA
AATATCAGCTTGGAATATTGTTAATGTTATACCTTTTATCACTTTTGCAT
TTTTTTTTTAAAATGGTGTGTTAGTCACCACAAATCTCATCTTCTAAAAT
ATGTTGTATTAAGAATAAGGTAACATTAAAAGGATTCACCGCAAACATAG
CTGAGACCCACAGAGGAATTCTTTCCTCATTTTATAGGTATGAGCATTTT
CAGTGCATGTAGGTCTGTGTACCATGTGTATGTCCAGTGCCCACAAAAGC
CAGAAGAGGGCCTCAGATCCTCGGGAACAGAGTTATGCTTCTTGAAAGCC
ACCATGTGGGTCCTGAGAATCAAACCCTAGTCCTCTGCAGGAGCAAGAGG
TGCTGTAAATTGCTGTGCCATTTCGCTAGCTGAGAGGAATTCTTCTGAGA
GCTAGGATTGGGACTTTAACTTGCTCCCGACCAAGAAGTGGCATGCACCT
ATGCCAACAACACTTGATCCTTCTTCCTATGACCCTCCCAAAAAGTACTG
AAACTCTGCGTAGACAGAGAGCTGTGCC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGGAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTTTGG
AAATCAGTCTGGCGGTTCCTTAGAAAATTGGACATAGTACTACCGGAGGA
TCCAGCGATACCTCTCCTGAACATATATCCAGAAGATGTCCCAACGGGTA
AGAATGGGTTTTGTATAGTAAGTGACAAACATTAGTCTGTTTATCTTGTC
AGGTAAATCTATATGTGGTATTTAAAAATTTGGAAAAATTCAATGCCTAT
TTAAATGGATAATTGCTTTTTCCCTGGNTTTGTGAAAATTAGTCTAATAT
ACCATATATCAGATATTTAATAGGTAAAGCTCTAAGGACTGTATACCAAA
ATTAAGGGAAGTGGTTTTAAATACTATCGAAAATTCCTCTGTCCCCAATC
TAGCAATGGTTGAGAAGCGTTTTTTAACCCACAAAACACCTGTCTGAAAA
TTATGAAGCACTCTGTAAACTTTCTCAGCCTCCTTATTTTCTTTGCCGGT
TTTGCGTTCTCA

Query= MSMg01no448_d21.b1 MSMg01no448_d21.b1 CHROMAT_FILE:
MSMg01no448_d21.b1 PHD_FILE: MSMg01no448_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:27 2005
         (420 letters)



>mm_chr3_128338823_128339645
          Length = 823

 Score =  694 bits (359), Expect = 0.0
 Identities = 382/391 (97%), Gaps = 3/391 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agattttatttaaatatcagcttggaatattgttaatgttataccttttatcacttttgc 60
           |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 391 agattttatttaaatatcagctcggaatattgttaattttataccttttatcacttttgc 332

                                                                       
Query: 61  attttttttt---taaaatggtgtgttagtcaccacaaatctcatcttctaaaatatgtt 117
           ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atttttttttaaaaaaaatggtgtgttagtcaccacaaatctcatcttctaaaatatgtt 272

                                                                       
Query: 118 gtattaagaataaggtaacattaaaaggattcaccgcaaacatagctgagacccacagag 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtattaagaataaggtaacattaaaaggattcaccgcaaacatagctgagacccacagag 212

                                                                       
Query: 178 gaattctttcctcattttataggtatgagcattttcagtgcatgtaggtctgtgtaccat 237
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaattctttccttattttataggtatgagcattttcagtgcatgtaggtctgtgtaccat 152

                                                                       
Query: 238 gtgtatgtccagtgcccacaaaagccagaagagggcctcagatcctcgggaacagagtta 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtgtatgtccagtgcccacaaaagccagaagagggcctcagatcctcgggaacagagtta 92

                                                                       
Query: 298 tgcttcttgaaagccaccatgtgggtcctgagaatcaaaccctagtcctctgcaggagca 357
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 91  tgcttcttgaaagccaccatgtgggtcctgggaatcaaaccctagtcctctgcaggagca 32

                                          
Query: 358 agaggtgctgtaaattgctgtgccatttcgc 388
           ||||||||| |||||||||||||||||||||
Sbjct: 31  agaggtgctctaaattgctgtgccatttcgc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 823
Length adjustment: 9
Effective length of query: 411
Effective length of database: 814
Effective search space:   334554
Effective search space used:   334554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)