MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-449D19
Chromosome	3 (Build37)
Map Location	50,939,688 - 50,939,925
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
Downstream gene	Ccrn4l, Elf2, A630062H14, 4930583H14Rik, LOC669130, Ndufc1, Narg1, Rab33b, Setd7, LOC100039684, Mgst2, Maml3, LOC433587
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039628 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039628
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC639469 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639469
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Slc7a11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26570 MGI:1347355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621304 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621304 MGI:3643374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039667 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ccrn4l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12457 MGI:109382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69257 MGI:1916507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630062H14 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:329636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4930583H14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67749 MGI:1914999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669130 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	Ndufc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66377 MGI:1913627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Narg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74838 MGI:1922088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab33b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19338 MGI:1330805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73251 MGI:1920501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039684 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039684
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Mgst2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211666 MGI:2448481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Maml3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433586 MGI:2389461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433587 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433587
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs

name	Slc7a11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80861466 GeneID:26570 MGI:1347355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 transcript_id : NM_011990.2

name	EG621304 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369543 GeneID:621304 MGI:3643374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG621304 transcript_id : XM_896343.2

name	Ccrn4l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33563247 GeneID:12457 MGI:109382
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4 carbon catabolite repression 4-like (S. cerevisiae) transcript_id : NM_009834.1

name	Elf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963704 GeneID:69257 MGI:1916507
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E74-like factor 2 transcript_id : NM_023502.1

name	A630062H14 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251134 GeneID:329636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein A630062H14 transcript_id : XM_001473003.1

name	4930583H14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365257 GeneID:67749 MGI:1914999
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930583H14 gene transcript_id : NM_026358.2

name	Ndufc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13384945 GeneID:66377 MGI:1913627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 transcript_id : NM_025523.1

name	Narg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28269696 GeneID:74838 MGI:1922088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NMDA receptor-regulated gene 1 transcript_id : NM_053089.2

name	Rab33b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394132 GeneID:19338 MGI:1330805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB33B, member of RAS oncogene family transcript_id : NM_016858.1

name	Setd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803031 GeneID:73251 MGI:1920501
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing (lysine methyltransferase) 7 transcript_id : NM_080793.4

name	LOC100039684 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251136 GeneID:100039684
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039684 transcript_id : XM_001473103.1

name	Mgst2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95007016 GeneID:211666 MGI:2448481
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microsomal glutathione S-transferase 2 transcript_id : NM_174995.2

name	Maml3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098004 GeneID:433586 MGI:2389461
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mastermind like 3 (Drosophila) transcript_id : NM_001004176.1

name	LOC433587 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251141 GeneID:433587
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs product : similar to mastermind-like 3 transcript_id : XM_001473484.1

name	Slc7a11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756011 CCDS:CCDS17335.1 GeneID:26570 MGI:1347355
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015359 - amino acid permease activity [Evidence IEA]; GO:0015171 - amino acid transporter activity [Evidence IEA]; GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium independent anionic amino acid transport system; amino acid transport system xc-; cystine/glutamate transporter; cysteine/glutamate transporter; subtle gray product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 protein_id : NP_036120.1

name	EG621304 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82889509 GeneID:621304 MGI:3643374
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901436.1

name	Ccrn4l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563248 CCDS:CCDS17336.1 GeneID:12457 MGI:109382
definition	GO_process : GO:0048511 - rhythmic process [Evidence IEA] codon_start : 1 note : carbon catabolite repression 4 homolog product : CCR4 carbon catabolite repression 4-like protein_id : NP_033964.1

name	Elf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963705 CCDS:CCDS17337.1 GeneID:69257 MGI:1916507
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : ets domain transcription factor product : ets family transcription factor ELF2A2 protein_id : NP_075991.1

name	A630062H14 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251135 GeneID:329636
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473053.1

name	4930583H14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385860 CCDS:CCDS17338.1 GeneID:67749 MGI:1914999
definition	codon_start : 1 exception : mismatches in translation product : ovary-specific acidic protein protein_id : NP_080634.1

name	Ndufc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384946 GeneID:66377 MGI:1913627
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 protein_id : NP_079799.1

name	Narg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28269697 CCDS:CCDS17340.1 GeneID:74838 MGI:1922088
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : N-terminal aceyltransferase 1 product : NMDA receptor-regulated gene 1 protein_id : NP_444319.2

name	Rab33b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394133 GeneID:19338 MGI:1330805
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 function : Rab family GTPase product : RAB33B, member of RAS oncogene family protein_id : NP_058554.1

name	Setd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490382 CCDS:CCDS17341.1 GeneID:73251 MGI:1920501
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0018024 - histone-lysine N-methyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence ISS] [Evidence IEA] codon_start : 1 product : SET domain-containing protein 7 protein_id : NP_542983.3

name	LOC100039684 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251137 GeneID:100039684
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473153.1

name	Mgst2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:95007017 GeneID:211666 MGI:2448481
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0008047 - enzyme activator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006691 - leukotriene metabolism [Evidence IEA] codon_start : 1 product : microsomal glutathione S-transferase 2 protein_id : NP_778160.2

name	Maml3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098005 CCDS:CCDS17342.1 GeneID:433586 MGI:2389461
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003713 - transcription coactivator activity [Evidence ISS] GO_process : GO:0007219 - Notch signaling pathway [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 exception : mismatches in translation product : mastermind-like 3 protein_id : NP_001004176.1

name	LOC433587 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251142 GeneID:433587
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473534.1

name	LOC100039628 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039628
definition	number : 1 pseudo : _no_value

name	LOC639469 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639469
definition	number : 1 pseudo : _no_value

name	LOC100039667 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039667
definition	number : 1 pseudo : _no_value

name	LOC669130 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251138 GeneID:669130
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to prothymosin alpha pseudo : _no_value transcript_id : XR_031180.1

clone name	MSMg01-080N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-511B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-449D19.T7 (MSMg01no449_d19.b1)	MSMg01-449D19.TJ (MSMg01no449_d19.g1)
ACC	AG537258	AG537259
length	730	740
length of high quality (start - end)	675 (54 - 728)	239 (83 - 321)
definition	CHROMAT_FILE: MSMg01no449_d19.b1 PHD_FILE: MSMg01no449_d19.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:18:48 2005	CHROMAT_FILE: MSMg01no449_d19.g1 PHD_FILE: MSMg01no449_d19.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:18:48 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NCCAACATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXCGCGGAATTCCTGATCTTTCCCAACTTTTATCATGAATGGGTGTTGG ATCTTGTCAAATGCTTTTTCTGCATCCAACGAGATGATCATGTGGTTTTT GTCTTTGAGTTTGTTTATATAGTGGATTACATTGATGGATTTTCGTATAT TAAACCATCCCTGCATTCCTGGAATAAAACCTACTTGGTCAGGATGGATG ATTGCTTTAATGTGATCTTGGATTCGGTTAGCGAGAATTTTATTGAGGAT TTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTG TTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAAT GAGTTGGGTAGCGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAG AACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACC CGTCTGGTCCTGGGCTTTTTTGGCTGGGAGACTATTTATAACTGCTTCTA TTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATTC AACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTT TTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTT GGATTTCTTCAGGATCTGTTGTTATGTCTC	AAAAAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXCAGAAAATCGCTCTATTCCTTATGGGAG AGAGAGGCACATTTGTAAAATTAAAATTCACCGCCTCTTTGATGAGAGGA TTTGCCGGCTCTTCTGTCCTTTTTAAAAACACTGTGTGCTTGGCAGGAAG AGCCAAGAAACTAAACCTCTCCTCAAGGACATTGGGGGTGAGCAGGAGCA AGCCGCTTGCTTTTCTTCTTTCAGATCTCAAGGCCGTGCGAGCCCTTTTC TAAAAGAACTAGGTAGGTGGAAGGTGGTTTCGTCNTTCTGTTCTGAGGAA CATGGCCTTGTCTGCGTGGCTTGATAATATCTGTTAATTCAGAGGAGAAA AACATCTTAGCTGTGGCAATGGCATTGTGCCACTAAAACAAAGACTGACT GGAGCTTTCTTTGCCTTTTTGGATTTTCCTCTTTTGAGACAGGTCTCATG TAACACTGTCTGCCTTCAGACTTGCTGTGTAGCCCAGGTGACTTTACACT TTTCATCCCCCTGCCTCTACCTCTGCATGCTGGGACTCCAGGTGTGTACT GCCATGCCAAGTTTGTGCAGTAATGGGGATTGGACCCAGGGCTTTGTGCA TACTAGGCAAGTACACTTTTTTTTGATTGACAGCCCCCAGCTCAAGGTTT TAGTGTCTTCATGTCCTGATTTGGGGGTATGTGTTCATGC
quality values	Open. Hide. 0 3 7 7 10 8 6 6 7 11 8 10 10 11 18 22 28 34 37 23 23 11 11 13 21 23 23 22 32 32 33 41 41 30 30 31 30 29 21 19 9 9 9 15 9 9 9 11 10 10 10 15 16 20 25 30 30 30 29 30 30 36 31 50 37 37 37 37 37 23 25 11 12 11 12 14 21 24 32 39 39 47 43 48 48 48 50 53 53 53 53 57 57 59 57 57 57 57 53 53 50 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 52 52 62 62 62 52 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 57 57 57 54 54 54 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 53 50 47 50 50 53 50 48 43 43 43 43 48 41 39 41 39 39 41 40 36 32 41 41 41 39 41 46 47 48 48 48 53 57 47 47 42 39 39 43 43 48 48 57 57 57 57 57 57 48 59 59 59 59 59 59 48 59 59 59 59 37 37 37 37 32 35 37 41 41 41 41 59 47 47 43 40 41 41 59 59 59 41 37 34 41 31 36 36 32 37 37 32 31 32 41 37 37 44 59 44 41 41 41 41 39 39 35 37 35 39 34 31 39 41 59 39 32 32 23 23 24 28 18 19 23 26 28 33 37 37 30 22 22 30 22 18 18 28 28 24 24 27 24 25 40 35 28 27 31 28 24 25 28 28 24 27 20 20 20 30 23 29 37 37 23 25 11 12 12	Open. Hide. 7 7 7 6 6 6 3 6 8 12 10 10 10 9 8 7 8 9 9 17 16 28 32 35 30 23 23 3 0 3 25 23 39 47 47 25 25 10 9 9 6 7 7 6 6 6 6 6 8 8 8 8 8 3 0 3 8 8 26 26 59 50 47 47 27 27 9 6 6 6 6 6 6 6 6 6 7 7 6 6 6 6 11 21 23 37 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 53 53 53 59 59 53 59 44 39 37 37 34 25 10 8 6 6 6 8 8 8 8 10 11 22 34 59 59 59 44 41 53 53 53 53 59 59 35 42 33 36 36 42 59 59 59 59 59 57 57 68 68 68 68 68 57 59 54 59 59 59 59 59 59 54 54 54 57 57 57 54 48 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 43 43 43 34 34 23 23 18 34 34 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 53 53 53 53 53 57 59 57 57 57 48 53 50 50 50 59 59 59 59 24 22 9 9 9 9 17 13 10 8 6 7 6 6 6 6 3 0 3 7 8 8 21 30 59 47 47 47 59 59 47 53 53 53 53 53 59 59 59 59 59 59 59 59 59 59 59 36 30 19 12 12 12 12 29 25 22 15 15 14 14 14 18 21 28 28 47 43 57 57 57 57 57 48 48 48 59 59 59 59 59 59 68 68 68 68 68 68 68 59 59 48 48 59 59 59 68 68 68 68 68 68 68 44 44 28 25 21 21 15 15 28 34 32 32 32 42 35 31 35 35 43 42 44 44 43 43 47 57 57 54 57 57 57 57 57 57 57 59 59 68 59 59 57 57 57 57 57 57 59 59 59 59 52 52 52 57 57 57 59 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 48 48 57 57 57 57 57 57 57 57 57 54 54 57 57 57 57 57 57 57 57 57 57 57 57 57 68 57 57 59 57 44 44 47 57 57 57 57 57 57 57 57 57 57 48 48 47 47 47 48 59 68 68 59 59 59 59 59 48 48 54 54 54 54 57 57 48 47 48 48 50 50 57 59 59 37 37 23 32 32 39 39 39 30 30 30 31 31 34 34 39 39 32 30 25 25 30 31 28 28 22 19 19 30 22 29 24 27 27 25 25 12 12 10 10 11 17 24 24 19 17 17 26 27 25 22 28 24 26 34 28 24 18 12 12 10 10 10 15 15 22 34 29 34 23 16 13 10 10 10 21 22 19 13 13 10 10 9 9 9 13 12 12 14 11 11 9 9 10 10 10 10 10 11 17 19 14 10 10 10 10 13 18 16 16 16 15 9 10 12 14 12 19 16 11 11 19 18 19 20 24 22 25 13 10 8 7 7 8 14 7 6 6 7 8 8 7 8 9 10 10 9 8 8 8 8 8 8 10 10 13 17 12

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no449_d19.g1 MSMg01no449_d19.g1 CHROMAT_FILE:
MSMg01no449_d19.g1 PHD_FILE: MSMg01no449_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:48 2005
         (239 letters)



>mm_chr3_50939488_50940126
          Length = 639

 Score =  429 bits (222), Expect = e-125
 Identities = 234/238 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctctattccttatgggagagagaggcacatttgtaaaattaaaattcaccgcctctttga 60
           |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||
Sbjct: 438 ctctattccttatgggagagagaggcacatttgtaaaattaaaagtcaatgcctctttga 379

                                                                       
Query: 61  tgagaggatttgccggctcttctgtcctttttaaaaacactgtgtgcttggcaggaagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgagaggatttgccggctcttctgtcctttttaaaaacactgtgtgcttggcaggaagag 319

                                                                       
Query: 121 ccaagaaactaaacctctcctcaaggacattgggggtgagcaggagcaagccgcttgctt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 318 ccaagaaactaaacctctcctcaaggacattgggggtgagcaggagcaagccgcttactt 259

                                                                     
Query: 181 ttcttctttcagatctcaaggccgtgcgagcccttttctaaaagaactaggtaggtgg 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcttctttcagatctcaaggccgtgcgagcccttttctaaaagaactaggtaggtgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information