Query= MSMg01no450_n08.b1 MSMg01no450_n08.b1 CHROMAT_FILE:
MSMg01no450_n08.b1 PHD_FILE: MSMg01no450_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:53 2005
(195 letters)
>mm_chr3_28627974_28628566
Length = 593
Score = 263 bits (136), Expect = 5e-75
Identities = 155/162 (95%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 1 agcccctggcctacttagaaatctgcatttttgctctgaatacacaccttagcacaaaac 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 359 agcccctggcctacttagaaatctgcatttttgctctgaatacacagcttagcacaaaac 300
Query: 61 tctgctgaactactttagcttacttttgactgactccagaaatttcaaattaaaaaaaaa 120
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 299 tctgctgaactactttagcttacttttgactgactccggaaatttcaagttaaaaaaaaa 240
Query: 121 aaaatctgttcccaaaggagaaaaacatcaaagtaaatatat 162
|| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 239 aa--tctgctcccaaaggagaaaaacatcaaagtatatatat 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 593
Length adjustment: 8
Effective length of query: 187
Effective length of database: 585
Effective search space: 109395
Effective search space used: 109395
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_n08.g1 MSMg01no450_n08.g1 CHROMAT_FILE:
MSMg01no450_n08.g1 PHD_FILE: MSMg01no450_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:53 2005
(453 letters)
>mm_chr3_28447900_28448752
Length = 853
Score = 816 bits (422), Expect = 0.0
Identities = 443/450 (98%)
Strand = Plus / Plus
Query: 4 tatcaaccccgcacgctatgtgttctcttcacgttgcagctgaggaaatggaatcctgac 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 204 tatcaaccccgcacgctatgtgttctcttcacgttgcagctgaggaaatggaatcccgac 263
Query: 64 tcttgctggcttggtcttgccactgtgtttccagctgtgtcagagacattcagagtctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcttgctggcttggtcttgccactgtgtttccagctgtgtcagagacattcagagtctgt 323
Query: 124 ggctgcaggggtgcacaccaggctcctggctagtccctcatccagagtggcagttttagc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 ggctgcaggggtgcacaccaggctcctggctagtccctcatccagagtggcagttttaac 383
Query: 184 ctagggatgctttgcttctcttccactctgatggggcagcccgggtcagaaagaatgcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctagggatgctttgcttctcttccactctgatggggcagcccgggtcagaaagaatgcct 443
Query: 244 tttgttttgtgtaggttactgtgtgccaaatgtccccaggccccagccggcagctgtacc 303
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 444 tttgttttgtgtaggttactgtgtgccaaatgtccccaggccccagccagaagctgtacc 503
Query: 304 ttgcgcctgccttctgagaggcactataatttgtctctgttctgtttgaaatgtgcacag 363
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 504 ttgcgcctgccttctgagaggcactataatttgtctctgttctgtttgtaatgtgcacag 563
Query: 364 ggatgggctgttagtcatgctgcaggcacggcagcccagtgctgaggaaagagtgaattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggatgggctgttagtcatgctgcaggcacggcagcccagtgctgaggaaagagtgaattt 623
Query: 424 cccacctccagtcagggtgagccgcaccat 453
|||||| ||||||||| |||||||||||||
Sbjct: 624 cccaccaccagtcaggatgagccgcaccat 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
